RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 LOC100506127A0A0U1RQW1 187 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 FCN1O00602 326 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 KRTAP10-11P60412 298 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 MXD1Q05195 221 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 PSG5Q15238 335 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 TCTEX1D1Q8N7M0 179 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 ZNF491Q8N8L2 437 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 MINDY2Q8NBR6 621 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 OR5M8Q8NGP6 311 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 LGALS14Q8TCE9 139 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 FLYWCH2Q96CP2 140 aaKnown RBP16.55■□□□□ 0.24
HMGB3-205ENST00000455596 CLCC1Q96S66 551 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 SDHAF2Q9NX18 166 aa16.55■□□□□ 0.24
HMGB3-205ENST00000455596 A0A1W2PN81 502 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 CD36P16671 472 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 CHRNA7P36544 502 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 RAB9AP51151 201 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 TMEM267Q0VDI3 215 aaPredicted RBP16.54■□□□□ 0.24
HMGB3-205ENST00000455596 HACD4Q5VWC8 232 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 RNF167Q9H6Y7 350 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 VSIG4Q9Y279 399 aa16.54■□□□□ 0.24
HMGB3-205ENST00000455596 PRKDCP78527 4128 aaKnown RBP16.54■□□□□ 0.24
HMGB3-205ENST00000455596 IGKV1D-8A0A087WSZ0 117 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 SCAND1P57086 179 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 PITPNAQ00169 270 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 CBX3Q13185 183 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 KIAA0141Q14154 515 aaPredicted RBP16.53■□□□□ 0.24
HMGB3-205ENST00000455596 C19orf54Q5BKX5 351 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 ZNF562Q6V9R5 426 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 H1FOOQ8IZA3 346 aaPredicted RBP16.53■□□□□ 0.24
HMGB3-205ENST00000455596 OR11H1Q8NG94 326 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 ST6GALNAC5Q9BVH7 336 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 GNB4Q9HAV0 340 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 FOXA2Q9Y261 457 aaPredicted RBP16.53■□□□□ 0.24
HMGB3-205ENST00000455596 NUBP2Q9Y5Y2 271 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 A3GALT2U3KPV4 340 aa16.53■□□□□ 0.24
HMGB3-205ENST00000455596 TMEM235A6NFC5 223 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 K7EIL1 84 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 CA2P00918 260 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 CLEC2LP0C7M8 214 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
HMGB3-205ENST00000455596 GNG2P59768 71 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 TAGLNQ01995 201 aaKnown RBP16.52■□□□□ 0.24
HMGB3-205ENST00000455596 FHL3Q13643 280 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 ZNF260Q3ZCT1 412 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 PPP1R27Q86WC6 154 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 DCSTAMPQ9H295 470 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
HMGB3-205ENST00000455596 SLC25A17O43808 307 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 LGALS7P47929 136 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 RUNX1Q01196 453 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 IDNKQ5T6J7 187 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 UNQ5815/PRO19632Q6UWF5 114 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 NUDCD2Q8WVJ2 157 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 C5orf30Q96GV9 206 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 FAM103A1Q9BTL3 118 aaKnown RBP16.51■□□□□ 0.23
HMGB3-205ENST00000455596 ZMAT5Q9UDW3 170 aaKnown RBP16.51■□□□□ 0.23
HMGB3-205ENST00000455596 ETV7Q9Y603 341 aa16.51■□□□□ 0.23
HMGB3-205ENST00000455596 WI2-2373I1.2A0A1W2PRP0 233 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 I3L521 148 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 SOX15O60248 233 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 CTXN2P0C2S0 81 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 OR8U8P0C7N1 319 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 RRASP10301 218 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 RTL8BQ17RB0 113 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 AKIRIN2Q53H80 203 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 ACTBL2Q562R1 376 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 C9orf66Q5T8R8 295 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 PYHIN1Q6K0P9 492 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 BVESQ8NE79 360 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 OR1N2Q8NGR9 330 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 ARPC1AQ92747 370 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 ADTRPQ96IZ2 230 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 HARBI1Q96MB7 349 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 OR5B12Q96R08 314 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 TPSG1Q9NRR2 321 aa16.5■□□□□ 0.23
HMGB3-205ENST00000455596 ZNF616Q08AN1 781 aa16.49■□□□□ 0.23
HMGB3-205ENST00000455596 TIMM50Q3ZCQ8 353 aa16.49■□□□□ 0.23
HMGB3-205ENST00000455596 LFNGQ8NES3 379 aa16.49■□□□□ 0.23
HMGB3-205ENST00000455596 OR5H6Q8NGV6 325 aa16.49■□□□□ 0.23
HMGB3-205ENST00000455596 SHOXO15266 292 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 IGLV2-23P01705 113 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 CD40LGP29965 261 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 DUTP33316 252 aaKnown RBP16.48■□□□□ 0.23
HMGB3-205ENST00000455596 GNB1P62873 340 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 FXYD3Q14802 87 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 TMEM177Q53S58 311 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 DEFB121Q5J5C9 76 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 CNIH2Q6PI25 160 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 CASTOR1Q8WTX7 329 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 SLC25A38Q96DW6 304 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 VCX3AQ9NNX9 186 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 OR2W1Q9Y3N9 320 aa16.48■□□□□ 0.23
HMGB3-205ENST00000455596 SEC14L6B5MCN3 397 aa16.47■□□□□ 0.23
HMGB3-205ENST00000455596 J3QRK9 145 aa16.47■□□□□ 0.23
HMGB3-205ENST00000455596 SSX5O60225 188 aa16.47■□□□□ 0.23
HMGB3-205ENST00000455596 TMEM127O75204 238 aa16.47■□□□□ 0.23
HMGB3-205ENST00000455596 CNIH1O95406 144 aa16.47■□□□□ 0.23
HMGB3-205ENST00000455596 NFYAP23511 347 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 634.2 ms