RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
SMPD4-213ENST00000454468 IGHV1-18A0A0C4DH31 117 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 OOEPA6NGQ2 149 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 TMPRSS2O15393 492 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 SFTPCP11686 197 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 DAZAP2Q15038 168 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-213ENST00000454468 RND1Q92730 232 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 POM121Q96HA1 1249 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 TMPRSS5Q9H3S3 457 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 WIPI2Q9Y4P8 454 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 BTBD17A6NE02 478 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 SS18L1O75177 396 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-213ENST00000454468 PITX3O75364 302 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 CLDN14O95500 239 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 IGKV1-5P01602 117 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 RHEBQ15382 184 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ACP7Q6ZNF0 438 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 MOB1BQ7L9L4 216 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 CLCF1Q9UBD9 225 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ANKHD1Q8IWZ3 2542 aaKnown RBP10.06□□□□□ -0.8
SMPD4-213ENST00000454468 A0A1B0GU03 582 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 MKRN2OSH3BPM6 223 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 PRRG2O14669 202 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
SMPD4-213ENST00000454468 LYL1P12980 280 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 REG1BP48304 166 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 RAB5CP51148 216 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-213ENST00000454468 KRTAP27-1Q3LI81 207 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 RBKSQ9H477 322 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 ASCL3Q9NQ33 180 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 AKAP13Q12802 2813 aa10.06□□□□□ -0.8
SMPD4-213ENST00000454468 H3BQ15 152 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 GYPAP02724 150 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 ID3Q02535 119 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 NMSQ5H8A3 153 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 GFRALQ6UXV0 394 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 Q6ZR03 302 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 DTD1Q8TEA8 209 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 STARD4Q96DR4 205 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-213ENST00000454468 A0A1W2PPV4 95 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 NDUFA6P56556 154 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 ARL16Q0P5N6 197 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 COTL1Q14019 142 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-213ENST00000454468 Q6ZSR3 168 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 OR4F5Q8NH21 305 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 OR4F4Q96R69 305 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 DYNLRB1Q9NP97 96 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 DECR2Q9NUI1 292 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 DMXL2Q8TDJ6 3036 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 MAP1LC3B2A6NCE7 125 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 MMP9P14780 707 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 EGR1P18146 543 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 LFNGQ8NES3 379 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 R3HDM4Q96D70 268 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 S1PR3Q99500 378 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 MAP1LC3BQ9GZQ8 125 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 PATZ1Q9HBE1 687 aaKnown RBP10.05□□□□□ -0.8
SMPD4-213ENST00000454468 PCSK5Q92824 1860 aa10.05□□□□□ -0.8
SMPD4-213ENST00000454468 ATMQ13315 3056 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 IQCF6A8MYZ5 107 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 SPRNQ5BIV9 151 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 FFAR4Q5NUL3 377 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ODAMA1E959 279 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-213ENST00000454468 SCAF4O95104 1147 aaKnown RBP10.04□□□□□ -0.8
SMPD4-213ENST00000454468 HBE1P02100 147 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 TAS2R30P59541 319 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ETFRF1Q6IPR1 90 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 LINC00596Q86U02 117 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 SSMEM1Q8WWF3 244 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 MALRD1Q5VYJ5 2156 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF292O60281 2723 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 ADGRG4Q8IZF6 3080 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 AHRRA9YTQ3 701 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 APELAP0DMC3 54 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 TNFSF4P23510 183 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 DLK1P80370 383 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 NCR3LG1Q68D85 454 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 TGIF2LXQ8IUE1 241 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 RAB39BQ96DA2 213 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 COQ2Q96H96 371 aa10.04□□□□□ -0.8
SMPD4-213ENST00000454468 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 TRGV8A0A0C4DH27 118 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 CYB5BO43169 146 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ACTL6BO94805 426 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms