RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF418Q8TF45 676 aaPredicted RBP7.07□□□□□ -1.28
SYNE1-214ENST00000454018 C17orf50Q8WW18 174 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 GIMAP1Q8WWP7 306 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 ST6GALNAC6Q969X2 333 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 S1PR3Q99500 378 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 CCDC32Q9BV29 185 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 MEGF9Q9H1U4 602 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF221Q9UK13 617 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 SLC45A2Q9UMX9 530 aa7.07□□□□□ -1.28
SYNE1-214ENST00000454018 RBM7Q9Y580 266 aaKnown RBP7.07□□□□□ -1.28
SYNE1-214ENST00000454018 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
SYNE1-214ENST00000454018 MDFIC2A0A1B0GVS7 189 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 A0A1W2PPI3 338 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 M0QYG6 137 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 GAPDHP04406 335 aaKnown RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR8U9P0C7N5 309 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 AADACP22760 399 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 INPP1P49441 399 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 DYNLT3P51808 116 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 KLF9Q13886 244 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF846Q147U1 533 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 MSMO1Q15800 293 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 LRRC75BQ2VPJ9 315 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF660Q6AZW8 331 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 DHRS11Q6UWP2 260 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF833PQ6ZTB9 187 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 TGIF2LXQ8IUE1 241 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ODF3L1Q8IXM7 274 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF645Q8N7E2 425 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR4C16Q8NGL9 310 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR6F1Q8NGZ6 308 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR8U1Q8NH10 309 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SSMEM1Q8WWF3 244 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 RTN4IP1Q8WWV3 396 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 BORCS5Q969J3 196 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 MOB3AQ96BX8 217 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ABHD14BQ96IU4 210 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF48Q96MX3 618 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SDHCQ99643 169 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF2Q9BSG1 426 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 TINAGL1Q9GZM7 467 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 HILPDAQ9Y5L2 63 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 IGKV1D-13A0A0B4J2D9 117 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 IGHV1-3A0A0C4DH29 117 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 BTBD17A6NE02 478 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 DISC1C4P0D8 188 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 IGKV1-13P0DP09 117 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 IL7P13232 177 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 BRS3P32247 399 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 PPP5CP53041 499 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 FXYD4P59646 89 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 HILS1P60008 231 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 PLA1AQ53H76 456 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 Q6YL49 198 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 CCDC28AQ8IWP9 274 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 DYNAPQ8N1N2 210 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 TMEM86BQ8N661 226 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SIGLECL1Q8N7X8 197 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR4D10Q8NGI6 311 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 OR5R1Q8NH85 324 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 PRRT1Q99946 306 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF251Q9BRH9 671 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 FXYD6Q9H0Q3 95 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 DPAGT1Q9H3H5 408 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 ABCB10Q9NRK6 738 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SLC2A8Q9NY64 477 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 GAB2Q9UQC2 676 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 SOX21Q9Y651 276 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-214ENST00000454018 POMT1Q9Y6A1 747 aa7.06□□□□□ -1.28
SYNE1-214ENST00000454018 PGPEP1LA6NFU8 196 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 OR5H14A6NHG9 310 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 IFNA2P01563 188 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 H2AFB1P0C5Y9 115 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 H2AFB2P0C5Z0 115 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 GYPEP15421 78 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 IER3P46695 156 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 REG1BP48304 166 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 VAMP2P63027 116 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 DIAPH2-AS1Q14236 149 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 BAK1Q16611 211 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF57Q68EA5 555 aaPredicted RBP7.05□□□□□ -1.28
SYNE1-214ENST00000454018 FAAP20Q6NZ36 180 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 LHFPL1Q86WI0 220 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 LURAP1LQ8IV03 231 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 OR56B4Q8NH76 319 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 SECTM1Q8WVN6 248 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 SSX3Q99909 188 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 MRPL20Q9BYC9 149 aaKnown RBP7.05□□□□□ -1.28
SYNE1-214ENST00000454018 SLC5A7Q9GZV3 580 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 SDHAF2Q9NX18 166 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 SCP2D1Q9UJQ7 156 aa7.05□□□□□ -1.28
SYNE1-214ENST00000454018 TNCP24821 2201 aa7.04□□□□□ -1.28
SYNE1-214ENST00000454018 NAP1L6A6NFF2 107 aa7.04□□□□□ -1.28
SYNE1-214ENST00000454018 DNAJC9-AS1A6NH13 148 aa7.04□□□□□ -1.28
SYNE1-214ENST00000454018 ZNF785A8K8V0 405 aa7.04□□□□□ -1.28
SYNE1-214ENST00000454018 H3BUX3 64 aa7.04□□□□□ -1.28
SYNE1-214ENST00000454018 CLDN34H7C241 214 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms