RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 FCGR3BO75015 233 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 ABHD17BQ5VST6 288 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 SEMA5BQ9P283 1151 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 SPTBN1Q01082 2364 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 B4E171 279 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 S1PR2O95136 353 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 TSPAN7P41732 249 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 PCOLCEQ15113 449 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 MRPL54Q6P161 138 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 Q6ZN92 141 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 Q6ZPA2 131 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 TGIF2LYQ8IUE0 185 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 CARFQ8N187 725 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
UBE2D3-210ENST00000453744 MKRN2OSH3BPM6 223 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 RAMP3O60896 148 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 CXCL12P48061 93 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 HNRNPA3P51991 378 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 AESQ08117 197 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 OR1L6Q8NGR2 347 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 RTL8AQ9BWD3 113 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 IRF2P14316 349 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 ARG2P78540 354 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 MRPL49Q13405 166 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 TIPARPQ7Z3E1 657 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 PLPPR1Q8TBJ4 325 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 CIB3Q96Q77 187 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 HIPK2Q9H2X6 1198 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 BOKQ9UMX3 212 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 CADP27708 2225 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 LINC00205P59089 165 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 ARSJQ5FYB0 599 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 FZR1Q9UM11 496 aa11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 MUC22E2RYF6 1773 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-210ENST00000453744 H0Y8G0 127 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 TFF1P04155 84 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 HOXC12P31275 282 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 ODAMA1E959 279 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 OR7C2O60412 319 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 ZNF253O75346 499 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 OR2H2O95918 312 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 ADMP35318 185 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 RAB31Q13636 194 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 CADM4Q8NFZ8 388 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 PRRC2CQ9Y520 2896 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 LILRA1O75019 489 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 NPSP0C0P6 89 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 COX5BP10606 129 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 RAB4AP20338 218 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 FAM53AQ6NSI3 398 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 C17orf82Q86X59 251 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 ODF3L1Q8IXM7 274 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 GBGT1Q8N5D6 347 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 BEND2Q8NDZ0 799 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 POLR3KQ9Y2Y1 108 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 PPIAL4AQ9Y536 164 aa11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 HEATR1Q9H583 2144 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-210ENST00000453744 TRAV24A0A0B4J272 114 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 SRFP11831 508 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ZCCHC14Q8WYQ9 949 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 IGLV3-12A0A075B6K2 115 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 IGLV3-32A0A0A0MS00 114 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 SERF1AO75920 110 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 MT-CO2P00403 227 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 OR8I2Q8N0Y5 310 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 LAMA1P25391 3075 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ARL14EPLP0DKL9 152 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 LMO1P25800 156 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 ATP6V1FQ16864 119 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 TMEM42Q69YG0 159 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
UBE2D3-210ENST00000453744 M0QZK8 103 aa11.72□□□□□ -0.53
UBE2D3-210ENST00000453744 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-210ENST00000453744 IGKV1-39P01597 117 aa11.72□□□□□ -0.53
UBE2D3-210ENST00000453744 IGKV1D-39P04432 117 aa11.72□□□□□ -0.53
UBE2D3-210ENST00000453744 FXYD3Q14802 87 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms