RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 HRASLSQ9HDD0 168 aa7.13□□□□□ -1.27
COL8A1-203ENST00000452013 SLC23A1Q9UHI7 598 aa7.13□□□□□ -1.27
COL8A1-203ENST00000452013 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-203ENST00000452013 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
COL8A1-203ENST00000452013 NAV3Q8IVL0 2385 aa7.13□□□□□ -1.27
COL8A1-203ENST00000452013 SVEP1Q4LDE5 3571 aa7.13□□□□□ -1.27
COL8A1-203ENST00000452013 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 TRAV6A0A075B6T7 132 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 M0QZK8 103 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 RAB29O14966 203 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SLC31A2O15432 143 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SSNA1O43805 119 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 CREBL2O60519 120 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 OR2F2O95006 317 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 NDUFB6O95139 128 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SNRNP70P08621 437 aaKnown RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 M6PRP20645 277 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 HTR2BP41595 481 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 CBX5P45973 191 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 REG1BP48304 166 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 RELBQ01201 579 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 RBMS2Q15434 407 aaKnown RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 LAMTOR1Q6IAA8 161 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 GLDNQ6ZMI3 551 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 Q6ZPA2 131 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 TMEM219Q86XT9 240 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 UXS1Q8NBZ7 420 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 OR2T10Q8NGZ9 312 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 GIMAP1Q8WWP7 306 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SNAPC3Q92966 411 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SLC25A38Q96DW6 304 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 SLC25A33Q9BSK2 321 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 ZNF436Q9C0F3 470 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 AUNIPQ9H7T9 357 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 MTFP1Q9UDX5 166 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 MRPS7Q9Y2R9 242 aaKnown RBP7.12□□□□□ -1.27
COL8A1-203ENST00000452013 JMJD1CQ15652 2540 aa7.12□□□□□ -1.27
COL8A1-203ENST00000452013 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 A0A1W2PPI3 338 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 TMEM235A6NFC5 223 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 HMSDA8MTL9 139 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 HAX1O00165 279 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 BET1O15155 118 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 CHST1O43916 411 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 SLC22A5O76082 557 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR2A4O95047 310 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 IGKV1D-33P01593 117 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 IGKV1-33P01594 117 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 AKAIN1P0CW23 69 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 TMEM11P17152 192 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 AP2S1P53680 142 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-203ENST00000452013 TAS2R20P59543 309 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 RAB14P61106 215 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 EBI3Q14213 229 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 HABP2Q14520 560 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-203ENST00000452013 HNF4GQ14541 408 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-203ENST00000452013 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 FAM71F2Q6NXP2 309 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 TEX261Q6UWH6 196 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 IZUMO1Q8IYV9 350 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR11H7Q8NGC8 314 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR8H1Q8NGG4 311 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR52I2Q8NH67 350 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 CFHR4Q92496 578 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR2A7Q96R45 310 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 SLC25A21Q9BQT8 299 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-203ENST00000452013 GINS4Q9BRT9 223 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 TOLLIPQ9H0E2 274 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 PLSCR3Q9NRY6 295 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 OR1A1Q9P1Q5 309 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 GAB2Q9UQC2 676 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 RBM7Q9Y580 266 aaKnown RBP7.11□□□□□ -1.27
COL8A1-203ENST00000452013 U3KQ87 197 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 MXRA5Q9NR99 2828 aa7.11□□□□□ -1.27
COL8A1-203ENST00000452013 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 NCBP2LA6PVI3 153 aaKnown RBP7.1□□□□□ -1.27
COL8A1-203ENST00000452013 ST8SIA5O15466 376 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 MOSP00540 346 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 MC5RP33032 325 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 PRSS3P35030 304 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 OR3A3P47888 321 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 BLCAPP62952 87 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 Q5BKY6 102 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 IGSF11Q5DX21 431 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 LPCAT3Q6P1A2 487 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 ZNF833PQ6ZTB9 187 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 HOGA1Q86XE5 327 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 ODF3L1Q8IXM7 274 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 NUDCD2Q8WVJ2 157 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 MAFIPQ8WZ33 124 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 EAF1Q96JC9 268 aaPredicted RBP7.1□□□□□ -1.27
COL8A1-203ENST00000452013 AGMATQ9BSE5 352 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 CABLES2Q9BTV7 478 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 MED9Q9NWA0 146 aa7.1□□□□□ -1.27
COL8A1-203ENST00000452013 UBQLN2Q9UHD9 624 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms