RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 Q6ZRM9 215 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 DOLPP1Q86YN1 238 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 SLC24A4Q8NFF2 622 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 FAM216AQ8WUB2 273 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 EGLN1Q9GZT9 426 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 RRP8O43159 456 aaKnown RBP10.57□□□□□ -0.72
UBE3B-204ENST00000449510 SERF1AO75920 110 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 TMEM11P17152 192 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 CD81P60033 236 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 S1PR2O95136 353 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 NPSP0C0P6 89 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 RFPL3SP0C7P2 107 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 LIFP15018 202 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 NXPH1P58417 271 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
UBE3B-204ENST00000449510 CYP2G1PQ6ZSU1 146 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 WNT5BQ9H1J7 359 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 DLL3Q9NYJ7 618 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 POLDIP2Q9Y2S7 368 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
UBE3B-204ENST00000449510 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-204ENST00000449510 ZNF137PP52743 207 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 ID3Q02535 119 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 EXT1Q16394 746 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-204ENST00000449510 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 ZNF525Q8N782 197 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 OR2D3Q8NGH3 330 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 BLNKQ8WV28 456 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 LEAP2Q969E1 77 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 FBLN5Q9UBX5 448 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 WASHC3Q9Y3C0 194 aa10.57□□□□□ -0.72
UBE3B-204ENST00000449510 PLAUP00749 431 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 UCP1P25874 307 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 RBMXL3Q8N7X1 1067 aaKnown RBP10.56□□□□□ -0.72
UBE3B-204ENST00000449510 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 S1PR3Q99500 378 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 DEPPQ9NTK1 212 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 BET1LQ9NYM9 111 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
UBE3B-204ENST00000449510 M0R2Z0 102 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 SNAI2O43623 268 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 LYL1P12980 280 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 CD1BP29016 333 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 FGF12P61328 243 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 CISD2Q8N5K1 135 aaKnown RBP10.56□□□□□ -0.72
UBE3B-204ENST00000449510 OR2J1Q9GZK6 312 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 OR6C3Q9NZP0 311 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 CFHR1Q03591 330 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 TBC1D28Q2M2D7 210 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 RPEL1Q2QD12 228 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 DRAM1Q8N682 238 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 OR5A2Q8NGI9 324 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 DUSP23Q9BVJ7 150 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 ARFGEF3Q5TH69 2177 aa10.56□□□□□ -0.72
UBE3B-204ENST00000449510 SRIP30626 198 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 MFAP2P55001 183 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 FOXG1P55316 489 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-204ENST00000449510 HIST3H3Q16695 136 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 FAM173AQ9BQD7 235 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 TMEM208Q9BTX3 173 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-204ENST00000449510 RAMP3O60896 148 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 IL15RAQ13261 267 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 PQLC2Q6ZP29 291 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 PNRC2Q9NPJ4 139 aaKnown RBP10.55□□□□□ -0.72
UBE3B-204ENST00000449510 SCO2A0A1W2PP80 73 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 HELTA6NFD8 242 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 PRR19A6NJB7 356 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 M0QZK8 103 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 GGCTO75223 188 aaKnown RBP10.55□□□□□ -0.72
UBE3B-204ENST00000449510 UBE2G1P62253 170 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 TCTEX1D1Q8N7M0 179 aa10.55□□□□□ -0.72
UBE3B-204ENST00000449510 A0A0G2JMM0 328 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 A0A1W2PPB8 328 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 A0A1W2PRS3 328 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 KIR3DP1A8MWS1 328 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 IGHEP01854 428 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 GZMHP20718 246 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 CRYBB3P26998 211 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 HOXA4Q00056 320 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 STUMQ69YW2 141 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 LYG1Q8N1E2 194 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 CPEB3Q8NE35 698 aaKnown RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 ZNF835Q9Y2P0 537 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 TRIOO75962 3097 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 OR2H2O95918 312 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 ADMP35318 185 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 ZCCHC14Q8WYQ9 949 aaKnown RBP10.54□□□□□ -0.72
UBE3B-204ENST00000449510 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
UBE3B-204ENST00000449510 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms