RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CEACAM3P40198 252 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 LGALS4P56470 323 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 GPHA2Q96T91 129 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 HSD17B10Q99714 261 aaKnown RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 IGHV3OR16-10A0A075B7F0 116 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 SHOXO15266 292 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 MPPED1O15442 326 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 AKR1C4P17516 323 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 BPIFB3P59826 476 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 ZNF767PQ75MW2 155 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 RPEQ96AT9 228 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
SHMT2-203ENST00000449049 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-203ENST00000449049 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 TXNL1O43396 289 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 RAB25P57735 213 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 RPL30P62888 115 aaKnown RBP11.36□□□□□ -0.59
SHMT2-203ENST00000449049 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
SHMT2-203ENST00000449049 BRD3OSQ6XYD6 125 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 NANPQ8TBE9 248 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 DDB2Q92466 427 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 MALSU1Q96EH3 234 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 BEX2Q9BXY8 128 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 NAA60Q9H7X0 242 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 MED13LQ71F56 2210 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 LINC00473A8K010 186 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 RNF212BA8MTL3 300 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 C1QBP02746 253 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 GAPDHP04406 335 aaKnown RBP11.36□□□□□ -0.59
SHMT2-203ENST00000449049 IL5P05113 134 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 OR4E1P0C645 316 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 EPHA1P21709 976 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 F2RP25116 425 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 REG1BP48304 166 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 THBS3P49746 956 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 AP2S1P53680 142 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-203ENST00000449049 CATR1Q13166 79 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 GALNT14Q96FL9 552 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 ADTRPQ96IZ2 230 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 NABP2Q9BQ15 211 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 MRPL20Q9BYC9 149 aaKnown RBP11.36□□□□□ -0.59
SHMT2-203ENST00000449049 BEX1Q9HBH7 125 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 NUP50Q9UKX7 468 aa11.36□□□□□ -0.59
SHMT2-203ENST00000449049 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 A0A1W2PPI3 338 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 PRAF2O60831 178 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 DHFRP00374 187 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 LINC00205P59089 165 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 GLDNQ6ZMI3 551 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-203ENST00000449049 SGPP2Q8IWX5 399 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 DYNAPQ8N1N2 210 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 ZNF383Q8NA42 475 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 SMR3AQ99954 134 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 HILPDAQ9Y5L2 63 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-203ENST00000449049 C3orf85A0A1B0GTC6 90 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 B3GALNT1O75752 331 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 LY6G6DO95868 133 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
SHMT2-203ENST00000449049 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 OR51H1Q8NH63 302 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 TCTEX1D2Q8WW35 142 aa11.35□□□□□ -0.59
SHMT2-203ENST00000449049 LIN7CQ9NUP9 197 aaKnown RBP11.35□□□□□ -0.59
SHMT2-203ENST00000449049 C9orf170A2RU37 121 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 H0Y980 276 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 SFT2D2O95562 160 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 BRWD1-AS2P59051 145 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 DHRS2Q13268 280 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 SSX2Q16385 188 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 C4orf46Q504U0 113 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 C9orf139Q6ZV77 190 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 LYG2Q86SG7 212 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 TCTEX1D1Q8N7M0 179 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
SHMT2-203ENST00000449049 A0A0U1RQK1 487 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 HLA-AP01891 365 aaKnown RBP11.33□□□□□ -0.6
SHMT2-203ENST00000449049 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 VAMP1P23763 118 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 HABP2Q14520 560 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms