RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TUSC1Q2TAM9 212 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 LRRC75BQ2VPJ9 315 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 OR2B11Q5JQS5 317 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 MZT2BQ6NZ67 158 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 OR8H3Q8N146 312 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 C3orf56Q8N813 242 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 TCTEX1D2Q8WW35 142 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 CAPSLQ8WWF8 208 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 DUX5Q96PT3 197 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 RSRP1Q9BUV0 290 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 MEGF9Q9H1U4 602 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 SLC2A8Q9NY64 477 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 H3BUX3 64 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 H7C2Y5 167 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 WIPF1O43516 503 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 IGHV4-59P01825 116 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 RLN1P04808 185 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 BRS3P32247 399 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 BTCP35070 178 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 UCP3P55916 312 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 DEFA1P59665 94 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 DEFA3P59666 94 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 UBA52P62987 128 aaKnown RBP13.83□□□□□ -0.2
LIME1-202ENST00000444951 ASAH1Q13510 395 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 HES1Q14469 280 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 HNF4GQ14541 408 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 LY6EQ16553 131 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 AWAT1Q58HT5 328 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 FAM71F2Q6NXP2 309 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 CMTM1Q8IZ96 169 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 ZNF383Q8NA42 475 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 POC5Q8NA72 575 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 OR51H1Q8NH63 302 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 GAB2Q9UQC2 676 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 C14orf166Q9Y224 244 aaKnown RBP13.83□□□□□ -0.2
LIME1-202ENST00000444951 MEGF8Q7Z7M0 2845 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 PKD1L1Q8TDX9 2849 aa13.83□□□□□ -0.2
LIME1-202ENST00000444951 FAM240BA0A1B0GVZ2 78 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 LINC00473A8K010 186 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
LIME1-202ENST00000444951 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
LIME1-202ENST00000444951 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
LIME1-202ENST00000444951 ECI1P42126 302 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 RPL30P62888 115 aaKnown RBP13.82□□□□□ -0.2
LIME1-202ENST00000444951 Q6YL49 198 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 TMED4Q7Z7H5 227 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 BVESQ8NE79 360 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 CFHR4Q92496 578 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 AKR1E2Q96JD6 320 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 JMJD8Q96S16 334 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 VSIG4Q9Y279 399 aa13.82□□□□□ -0.2
LIME1-202ENST00000444951 PGLYRP1O75594 196 aaPredicted RBP13.81□□□□□ -0.2
LIME1-202ENST00000444951 IGKV1D-33P01593 117 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 IGKV1-33P01594 117 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 APOA2P02652 100 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 CTSDP07339 412 aaPredicted RBP13.81□□□□□ -0.2
LIME1-202ENST00000444951 S100GP29377 79 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 THBS3P49746 956 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 PIGPP57054 158 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 RBMS2Q15434 407 aaKnown RBP13.81□□□□□ -0.2
LIME1-202ENST00000444951 DPAGT1Q9H3H5 408 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 SLC2A9Q9NRM0 540 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 GPR132Q9UNW8 380 aa13.81□□□□□ -0.2
LIME1-202ENST00000444951 BTBD17A6NE02 478 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 NDUFB6O95139 128 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 AKR1C4P17516 323 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 IER3P46695 156 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 SURF2Q15527 256 aaPredicted RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 MSMO1Q15800 293 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 FBLN7Q53RD9 439 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 TBC1D26Q86UD7 250 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 ADAD2Q8NCV1 583 aaKnown RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 ENKURQ8TC29 256 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 HSD17B10Q99714 261 aaKnown RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
LIME1-202ENST00000444951 C5orf66Q9H5L9 145 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 FLVCR2Q9UPI3 526 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
LIME1-202ENST00000444951 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 H0YJW9 148 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 ARPC1BO15143 372 aaKnown RBP13.79□□□□□ -0.2
LIME1-202ENST00000444951 FCGR3BO75015 233 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 PEX14O75381 377 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 CD1BP29016 333 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 CATR1Q13166 79 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
LIME1-202ENST00000444951 CCDC71LQ8N9Z2 235 aa13.79□□□□□ -0.2
LIME1-202ENST00000444951 PIFOQ8TCI5 191 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms