RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 GYPAP02724 150 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 FHITP49789 147 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 LOXL3P58215 753 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 BRWD1-AS2P59051 145 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 TMEM267Q0VDI3 215 aaPredicted RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 MIDNQ504T8 468 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 DUX4L9Q6RFH8 374 aaPredicted RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 TGIF2LYQ8IUE0 185 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 CCL13Q99616 98 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 ATP5SQ99766 215 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 C19orf12Q9NSK7 152 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 UQCC1Q9NVA1 299 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 FAM96BQ9Y3D0 163 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 TRGV10A0A0A0MS01 117 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 IGHV3-7P01780 117 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 OPN1MWP04001 364 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 CD55P08174 381 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 SNRNP70P08621 437 aaKnown RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 OPN1MW2P0DN77 364 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 OPN1MW3P0DN78 364 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 LINC00205P59089 165 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 UBE2KP61086 200 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 TLE1Q04724 770 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
RBM39-216ENST00000444878 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
RBM39-216ENST00000444878 RNASEK-C17orf49H0YIS7 233 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 TRIM77I1YAP6 450 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 KALRNO60229 2985 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 CLDN14O95500 239 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 METTL15P1P0C7V9 234 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 ADCYAP1P18509 176 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 TAS2R30P59541 319 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 TNFRSF9Q07011 255 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 SLC25A24Q6NUK1 477 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 ZNF788Q6ZQV5 615 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 H2BFWTQ7Z2G1 175 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 CD300LFQ8TDQ1 290 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 RHOVQ96L33 236 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 FAM234AQ9H0X4 552 aa11.34□□□□□ -0.59
RBM39-216ENST00000444878 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
RBM39-216ENST00000444878 KBTBD11-OT1A0A1B0GTJ5 212 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 P0C879 139 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 CGB3P0DN86 165 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 CGB7P0DN87 165 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
RBM39-216ENST00000444878 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 SVBPQ8N300 66 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 FAM216BQ8N7L0 139 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 FAM213BQ8TBF2 198 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 EGLN1Q9GZT9 426 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 SAP30LQ9HAJ7 183 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 CLN8Q9UBY8 286 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 IFNA5P01569 189 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 ZNF134P52741 427 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
RBM39-216ENST00000444878 HBG1P69891 147 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 HBG2P69892 147 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 KLRB1Q12918 225 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
RBM39-216ENST00000444878 RBKSQ9H477 322 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 ATRXP46100 2492 aa11.33□□□□□ -0.6
RBM39-216ENST00000444878 MED19A0JLT2 244 aaPredicted RBP11.32□□□□□ -0.6
RBM39-216ENST00000444878 M0R1X1 148 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 RAB29O14966 203 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 FCGR3BO75015 233 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 PROP1O75360 226 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 RBMXL2O75526 392 aaKnown RBP11.32□□□□□ -0.6
RBM39-216ENST00000444878 CD5P06127 495 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 SNCAP37840 140 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 RAB7AP51149 207 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 RUNX1Q01196 453 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 IFI27L2Q9H2X8 130 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 TRAV38-1A0A0B4J264 116 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 NKX6-3A6NJ46 265 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 CA7P43166 264 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 NCMAPQ5T1S8 102 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 LEAP2Q969E1 77 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 ABHD14AQ9BUJ0 271 aa11.32□□□□□ -0.6
RBM39-216ENST00000444878 CARHSP1Q9Y2V2 147 aaKnown RBP11.32□□□□□ -0.6
RBM39-216ENST00000444878 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms