RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 SCAF4O95104 1147 aaKnown RBP12.95□□□□□ -0.34
SNX13-204ENST00000444712 THBS3P49746 956 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 BRWD1-AS2P59051 145 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 UBE2KP61086 200 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 HBG1P69891 147 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 HBG2P69892 147 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 LY6DQ14210 128 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 CLINT1Q14677 625 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 HFEQ30201 348 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 PXDC1Q5TGL8 231 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 CIB3Q96Q77 187 aaPredicted RBP12.95□□□□□ -0.34
SNX13-204ENST00000444712 S1PR3Q99500 378 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 RPUSD1Q9UJJ7 312 aaKnown RBP12.95□□□□□ -0.34
SNX13-204ENST00000444712 IGF2RP11717 2491 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 MARCH11A6NNE9 402 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 CST7O76096 145 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 FSTL3O95633 263 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 DANCRP0C864 163 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 DAOP14920 347 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 PPOXP50336 477 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 ERVK-16P61578 105 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 RPL31P62899 125 aaKnown RBP12.95□□□□□ -0.34
SNX13-204ENST00000444712 PJVKQ0ZLH3 352 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 NCR3LG1Q68D85 454 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 HSD17B11Q8NBQ5 300 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 LINC00052Q96N35 136 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 TMEM204Q9BSN7 226 aa12.95□□□□□ -0.34
SNX13-204ENST00000444712 UMAD1C9J7I0 102 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 TNFRSF13BO14836 293 aaPredicted RBP12.94□□□□□ -0.34
SNX13-204ENST00000444712 FCGR3BO75015 233 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 IFNA5P01569 189 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 NFYBP25208 207 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
SNX13-204ENST00000444712 ZNF134P52741 427 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 OR4S2Q8NH73 311 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 ZNF714Q96N38 554 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 HCFC1P51610 2035 aa12.94□□□□□ -0.34
SNX13-204ENST00000444712 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 PLAUP00749 431 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 IAPPP10997 89 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 CT45A1Q5HYN5 189 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 Q6ZRG5 221 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 ODF3L1Q8IXM7 274 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 COMMD1Q8N668 190 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 CT45A3Q8NHU0 189 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 ZG16O60844 167 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 PROP1O75360 226 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 NQO2P16083 231 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 CAMLGP49069 296 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 RPL39P5Q59GN2 51 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 HEPN1Q6WQI6 88 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
SNX13-204ENST00000444712 ZNF295-AS1Q8N0V1 137 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 TMEM217Q8N7C4 229 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 RBKSQ9H477 322 aa12.93□□□□□ -0.34
SNX13-204ENST00000444712 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 B8ZZF3 427 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 H3BP45 60 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 RBMXL2O75526 392 aaKnown RBP12.92□□□□□ -0.34
SNX13-204ENST00000444712 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
SNX13-204ENST00000444712 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
SNX13-204ENST00000444712 BTNL8Q6UX41 500 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 LYPD6BQ8NI32 183 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 DDB2Q92466 427 aa12.92□□□□□ -0.34
SNX13-204ENST00000444712 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
SNX13-204ENST00000444712 SLC31A2O15432 143 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 SIAH2O43255 324 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 PRH1P02810 166 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 TFF3Q07654 80 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 TMEM267Q0VDI3 215 aaPredicted RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 SLC25A24Q6NUK1 477 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 C19orf12Q9NSK7 152 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 LOXP28300 417 aaPredicted RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 AARDQ4LEZ3 155 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 SPANXN5Q5MJ07 72 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 PRAMEF5Q5TYX0 476 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 OR2G3Q8NGZ4 309 aa12.91□□□□□ -0.34
SNX13-204ENST00000444712 H1FXQ92522 213 aaKnown RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 NARS2Q96I59 477 aaKnown RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
SNX13-204ENST00000444712 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 AGAP20933 346 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 ZNF273Q14593 569 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 TUSC1Q2TAM9 212 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
SNX13-204ENST00000444712 TMEM14EPQ6UXP3 125 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 C8orf31Q8N9H6 132 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms