RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 MED13LQ71F56 2210 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 UBE2L5PA0A1B0GUS4 154 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 GNG7O60262 68 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 WISP1O95388 367 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 APELAP0DMC3 54 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 IFITM3Q01628 133 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 FOXL2NBQ6ZUU3 175 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 H7BYZ3 331 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 HPXP02790 462 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ARL3P36405 182 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TMEM18Q96B42 140 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 HIF1ANQ9NWT6 349 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ELF5Q9UKW6 265 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 LINC00312Q9Y6C7 94 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ZNF320A2RRD8 509 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 MFNGO00587 321 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 SLC38A11Q08AI6 406 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ADIRFQ15847 76 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 MMD2Q8IY49 270 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TM2D1Q9BX74 207 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 PPP1R3EQ9H7J1 279 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 PRR13Q9NZ81 148 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 OR1A1Q9P1Q5 309 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 IGKV1-9A0A0C4DH69 117 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 E7EQL1 145 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 J3QR06 171 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 RAB32Q13637 225 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 TMEM147Q9BVK8 224 aa11.89□□□□□ -0.51
SMARCA4-204ENST00000444061 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 C12orf77C9JDV5 145 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 DKK1O94907 266 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 SLC25A6P12236 298 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 UNC119Q13432 240 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 CTRB1P17538 263 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 ZNF79Q15937 498 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 BAGE2Q86Y30 109 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 ZNF524Q96C55 264 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 IL36RNQ9UBH0 155 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 PTBP3O95758 552 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 PF4V1P10720 104 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 DVL1P1P54792 670 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 OR13A1Q8NGR1 328 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 URGCP-MRPS24S4R325 110 aa11.88□□□□□ -0.51
SMARCA4-204ENST00000444061 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 J3QRE1 110 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 HIST1H3AP68431 136 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 A0A0G2JK05 382 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 HAX1O00165 279 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 PLAUP00749 431 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 HGFACQ04756 655 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 DCTN5Q9BTE1 182 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 TIMM8BQ9Y5J9 83 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 PLA2G10O15496 165 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 SLC25A17O43808 307 aa11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 PARP12Q9H0J9 701 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-204ENST00000444061 CDS2O95674 445 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 LCN15Q6UWW0 184 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 LYZL2Q7Z4W2 148 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 OR2T10Q8NGZ9 312 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 NTNG2Q96CW9 530 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 FAM24AA6NFZ4 105 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 CCL3L1P16619 93 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 RAB4AP20338 218 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 RTN4RL2Q86UN3 420 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 NMES1Q9C002 83 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 A0A1B0GU03 582 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 ZNF250P15622 560 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 TXN2Q99757 166 aa11.86□□□□□ -0.51
SMARCA4-204ENST00000444061 PCDH15Q96QU1 1955 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms