RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 DCAF12Q5T6F0 453 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SLC23A3Q6PIS1 610 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CD300LDQ6UXZ3 194 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 Q6ZVL8 140 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 RNF44Q7L0R7 432 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 OLIG3Q7RTU3 272 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 ZNF550Q7Z398 422 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 BPIFA4PQ86YQ2 179 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 PIANPQ8IYJ0 282 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SLC25A45Q8N413 288 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CSNK1A1LQ8N752 337 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 GVQW1Q8N7I0 195 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 OR4F5Q8NH21 305 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 APOBEC4Q8WW27 367 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 SPSB4Q96A44 273 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C8orf44Q96CB5 159 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 KTI12Q96EK9 354 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 OR4F4Q96R69 305 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MS4A5Q9H3V2 200 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 ZNF665Q9H7R5 613 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SH2D2AQ9NP31 389 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MMP25Q9NPA2 562 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CMC2Q9NRP2 79 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SLC7A10Q9NS82 523 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MRPL27Q9P0M9 148 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 FBXL7Q9UJT9 491 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 IGKV6-21A0A0C4DH24 114 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LRRC3CA6NJW4 275 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ANKRD30BLA7E2S9 258 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 NPIPB5A8MRT5 1133 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 H7C1C5 153 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 DEGS1O15121 323 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TNFP01375 233 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ZNF708P17019 499 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 IL3RAP26951 378 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ADMP35318 185 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 APOBEC1P41238 236 aaKnown RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 FUT6P51993 359 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PCBP3P57721 371 aaKnown RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 ZNF85Q03923 595 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ACSF3Q4G176 576 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 GLYATL3Q5SZD4 288 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TMEM215Q68D42 235 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ZNF841Q6ZN19 808 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SYS1Q8N2H4 156 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OR51G1Q8NGK1 321 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LHX4Q969G2 390 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 WDYHV1Q96HA8 205 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PLEKHF2Q9H8W4 249 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ST20Q9HBF5 79 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 FGF21Q9NSA1 209 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 DECR2Q9NUI1 292 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SLC39A9Q9NUM3 307 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 NAT8BQ9UHF3 227 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 NSD1Q96L73 2696 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 HIVEP1P15822 2718 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TRAV9-2A0A087WT02 112 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 A0A1B0GW64 132 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SNURFLB1AK76 121 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 K7N7A8 449 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 MSTNO14793 375 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 NUPR1O60356 82 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SLC16A7O60669 478 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PF4P02776 101 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 KLK1P06870 262 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PFN1P07737 140 aaKnown RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 GLI4P10075 376 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LIFP15018 202 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CBLN1P23435 193 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CFHR2P36980 270 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DL1P43626 348 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 SUMO3P55854 103 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 TCL1AP56279 114 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LCN2P80188 198 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 GAB4Q2WGN9 574 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ANXA2RQ3ZCQ2 193 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 GGTA1PQ4G0N0 100 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TTC32Q5I0X7 151 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SP5Q6BEB4 398 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 FBXL22Q6P050 247 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 INO80CQ6PI98 192 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 C1orf229Q6ZS94 237 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 RFLNAQ6ZTI6 216 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TCF24Q7RTU0 167 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TCF23Q7RTU1 214 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 BHLHA9Q7RTU4 235 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ADGRE4PQ86SQ3 457 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 AMZ2Q86W34 360 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OOSP2Q86WS3 158 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TMEM86AQ8N2M4 240 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 DEFB125Q8N687 156 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TEX29Q8N6K0 151 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OR4D11Q8NGI4 311 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OR51A4Q8NGJ6 313 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SGMS2Q8NHU3 365 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LYPD6BQ8NI32 183 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SLC25A40Q8TBP6 338 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ZNF418Q8TF45 676 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 SSC4DQ8WTU2 575 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CHRNA10Q9GZZ6 450 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms