RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 C19orf12Q9NSK7 152 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TAS2R8Q9NYW2 309 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 OR1A1Q9P1Q5 309 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 SLC25A10Q9UBX3 287 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-206ENST00000441089 ANXA10Q9UJ72 324 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 TRAPPC2LQ9UL33 140 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 FLVCR2Q9UPI3 526 aa3.84□□□□□ -1.79
PTPN4-206ENST00000441089 STARD9Q9P2P6 4700 aa3.84□□□□□ -1.8
PTPN4-206ENST00000441089 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 A0A0B4J293 547 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NAP1L6A6NFF2 107 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 OR5H14A6NHG9 310 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NDUFA2O43678 99 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 TUSC2O75896 110 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 PTTG1O95997 202 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 HBZP02008 142 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 TCRBP04435 133 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 IGLL1P15814 213 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 RPS2P15880 293 aaKnown RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 CCL3L1P16619 93 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NDUFB7P17568 137 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NFYAP23511 347 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 GLP1RP43220 463 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DLX6P56179 175 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 EDDM3BP56851 147 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DEFA1P59665 94 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DEFA3P59666 94 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 AP3S2P59780 193 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 MRPS15P82914 257 aaKnown RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 PAX8Q06710 450 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 GNMTQ14749 295 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 ACTBL2Q562R1 376 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 RNASE10Q5GAN6 216 aaKnown RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 GPR157Q5UAW9 335 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 AADACL3Q5VUY0 350 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 WDR25Q64LD2 544 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DHRS7BQ6IAN0 325 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 BTNL3Q6UXE8 466 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF782Q6ZMW2 699 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 MOB1BQ7L9L4 216 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 SLC36A1Q7Z2H8 476 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 MUC20Q8N307 709 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 C11orf42Q8N5U0 333 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DUSP18Q8NEJ0 188 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 WFDC9Q8NEX5 89 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 OR52L2PQ8NGH6 319 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 OR51S1Q8NGJ8 323 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 OR5D13Q8NGL4 314 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 OR5H2Q8NGV7 314 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 RFESDQ8TAC1 157 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 DEDD2Q8WXF8 326 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 LINC00476Q8WZB0 136 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 CORO2AQ92828 525 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 CREB3L1Q96BA8 519 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 R3HDM4Q96D70 268 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 MED30Q96HR3 178 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NEU1Q99519 415 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 C7orf50Q9BRJ6 194 aaKnown RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 FXYD6Q9H0Q3 95 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 TAF9BQ9HBM6 251 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 MCUBQ9NWR8 336 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 SLC2A8Q9NY64 477 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 CALYQ9NYX4 217 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 EHFQ9NZC4 300 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 ZMAT5Q9UDW3 170 aaKnown RBP3.83□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF221Q9UK13 617 aa3.83□□□□□ -1.8
PTPN4-206ENST00000441089 TRBV6-7A0A0A0MS04 114 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV3-43A0A0B4J1X8 118 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 IGKV1D-13A0A0B4J2D9 117 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 KIR2DS1A0A191URI9 304 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 FAM240BA0A1B0GVZ2 78 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 CENPXA8MT69 81 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 A8MXK9 166 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 DISC1C4P0D8 188 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 NPIPB11E5RHQ5 1161 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 BET1O15155 118 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 SLC31A2O15432 143 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 NDUFB3O43676 98 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 NDUFB6O95139 128 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 PPYP01298 95 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 OR5H8P0DN80 308 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV3-43DP0DP04 118 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 IGKV1-13P0DP09 117 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 TBPP20226 339 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 AADACP22760 399 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 FCGR2CP31995 323 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 FAUP35544 74 aaKnown RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 KIR2DS4P43632 304 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 OR3A3P47888 321 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 NPY4RP50391 375 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 DLX1P56177 255 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 RAB25P57735 213 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 TAS2R46P59540 309 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ARPC4P59998 168 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 PAX2Q02962 417 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms