RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR4A16Q8NH70 328 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 OR1L1Q8NH94 360 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 RNASEH2CQ8TDP1 164 aaKnown RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 TRAV24A0A0B4J272 114 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 LILRA1O75019 489 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 SERF1AO75920 110 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1-39P01597 117 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 IGKV1D-39P04432 117 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 SRD5A2P31213 254 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 CYB561P49447 251 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 LINC00205P59089 165 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 ACTL10Q5JWF8 245 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 ZNF324BQ6AW86 544 aaPredicted RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 C17orf82Q86X59 251 aaPredicted RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 NPCDR1Q9BY65 106 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
COPB1-202ENST00000439561 C11orf1Q9H5F2 150 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 PSG11Q9UQ72 335 aa7.67□□□□□ -1.18
COPB1-202ENST00000439561 IGLV3-12A0A075B6K2 115 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 ODAMA1E959 279 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 SH2D1BO14796 132 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 NUPR1O60356 82 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 TFF1P04155 84 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 C1orf194Q5T5A4 169 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 MRPL54Q6P161 138 aaKnown RBP7.66□□□□□ -1.18
COPB1-202ENST00000439561 TIPARPQ7Z3E1 657 aaKnown RBP7.66□□□□□ -1.18
COPB1-202ENST00000439561 KCNE4Q8WWG9 221 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 WDYHV1Q96HA8 205 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 SFRP2Q96HF1 295 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 ENY2Q9NPA8 101 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 DCAF16Q9NXF7 216 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 PTPRSQ13332 1948 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 M0QZK8 103 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 DLEU1O43261 78 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 FCGR3BO75015 233 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 GGCTO75223 188 aaKnown RBP7.66□□□□□ -1.18
COPB1-202ENST00000439561 OR2H2O95918 312 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 AESQ08117 197 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 TDRG1Q3Y452 100 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 PCSK4Q6UW60 755 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 ASCL4Q6XD76 172 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 AGBL5Q8NDL9 886 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 LSM10Q969L4 123 aaKnown RBP7.66□□□□□ -1.18
COPB1-202ENST00000439561 STARD4Q96DR4 205 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 FOXJ2Q9P0K8 574 aa7.66□□□□□ -1.18
COPB1-202ENST00000439561 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ETV2O00321 342 aaPredicted RBP7.65□□□□□ -1.18
COPB1-202ENST00000439561 IL18BPO95998 194 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ERVK-16P61578 105 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 MIC13Q5XKP0 118 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ETFRF1Q6IPR1 90 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 RTL8AQ9BWD3 113 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 OPN3Q9H1Y3 402 aaPredicted RBP7.65□□□□□ -1.18
COPB1-202ENST00000439561 TMEM106BQ9NUM4 274 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 TCFL5Q9UL49 500 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 C20orf202A1L168 122 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ZNF253O75346 499 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 IGLV3-19P01714 112 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 LINC01551Q86U37 167 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 OR8I2Q8N0Y5 310 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 CADM4Q8NFZ8 388 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 DIRC2Q96SL1 478 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 DUSP23Q9BVJ7 150 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 OR2J1Q9GZK6 312 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 HIPK2Q9H2X6 1198 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 ZDBF2Q9HCK1 2354 aa7.65□□□□□ -1.18
COPB1-202ENST00000439561 EML6Q6ZMW3 1958 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 IGHV1-45A0A0A0MS14 117 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A10PA6NDY2 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A18PA6NE21 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A16PA6NEW6 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A20PA6NIJ5 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A8PA6NJQ4 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A7PA6NKC0 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A22PA8MWA6 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A12PA8MX19 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A5PA8MXJ8 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A23PA8MXZ1 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 H0Y8G0 127 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 PDE6DO43924 150 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 OR7C2O60412 319 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A15PP0C7V4 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A13PP0C7W8 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A14PP0C7W9 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FAM90A24PP0C7X0 464 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 CD82P27701 267 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 CD1BP29016 333 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 RANP62826 216 aaKnown RBP7.65□□□□□ -1.19
COPB1-202ENST00000439561 GNB1P62873 340 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FXYD3Q14802 87 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 ATP6V1FQ16864 119 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 VKORC1L1Q8N0U8 176 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms