RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 CT45A6P0DMU7 189 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 CT45A5P0DMU8 189 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 CT45A7P0DMV0 189 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 PI3P19957 117 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 CD1BP29016 333 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 BRS3P32247 399 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 DHODHQ02127 395 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 CBX3Q13185 183 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 SSX2Q16385 188 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 TRIM16LQ309B1 348 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 CCBE1Q6UXH8 406 aaPredicted RBP10.24□□□□□ -0.77
SCLT1-202ENST00000439369 TMED4Q7Z7H5 227 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 TBC1D26Q86UD7 250 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 TCTEX1D2Q8WW35 142 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 SMR3AQ99954 134 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
SCLT1-202ENST00000439369 NAA60Q9H7X0 242 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 IGHV3OR16-10A0A075B7F0 116 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 TEX13DA0A0J9YY54 714 aaPredicted RBP10.23□□□□□ -0.77
SCLT1-202ENST00000439369 A0A0U1RQK1 487 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 INMT-MINDY4F8WBC2 141 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 H0YJW9 148 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 DHFRP00374 187 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 ANXA3P12429 323 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 SRPXP78539 464 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 RTL8BQ17RB0 113 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 THNSL2Q86YJ6 484 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 PDPNQ86YL7 162 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 ZNF383Q8NA42 475 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
SCLT1-202ENST00000439369 CFHR4Q92496 578 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 TMEM230Q96A57 120 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 BEX2Q9BXY8 128 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 FLVCR2Q9UPI3 526 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 HILPDAQ9Y5L2 63 aa10.23□□□□□ -0.77
SCLT1-202ENST00000439369 MAP1AP78559 2803 aaPredicted RBP10.22□□□□□ -0.77
SCLT1-202ENST00000439369 TRAV6A0A075B6T7 132 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 C3orf85A0A1B0GTC6 90 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 LINC00473A8K010 186 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 TIMM23O14925 209 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 TNFSF12O43508 249 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 IFNA2P01563 188 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 OR4E1P0C645 316 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 RPA2P15927 270 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 AKR1C4P17516 323 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 REG1BP48304 166 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 RPL30P62888 115 aaKnown RBP10.22□□□□□ -0.77
SCLT1-202ENST00000439369 EBI3Q14213 229 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 MOB3BQ86TA1 216 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 DYNAPQ8N1N2 210 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 OR4S2Q8NH73 311 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 RNF5Q99942 180 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 GPN1Q9HCN4 374 aaPredicted RBP10.22□□□□□ -0.77
SCLT1-202ENST00000439369 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
SCLT1-202ENST00000439369 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 VENTXO95231 258 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 SFT2D2O95562 160 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
SCLT1-202ENST00000439369 FAM106CPP0CH98 169 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 SPNP16150 400 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.77
SCLT1-202ENST00000439369 UCP1P25874 307 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 SUPT4H1P63272 117 aaKnown RBP10.21□□□□□ -0.77
SCLT1-202ENST00000439369 C4orf46Q504U0 113 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 LYG2Q86SG7 212 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 SPAG16Q8N0X2 631 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 CADM3Q8N126 398 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 DRAXINQ8NBI3 349 aaPredicted RBP10.21□□□□□ -0.77
SCLT1-202ENST00000439369 OR8H1Q8NGG4 311 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 OR4C13Q8NGP0 309 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 OR51H1Q8NH63 302 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.77
SCLT1-202ENST00000439369 C17orf50Q8WW18 174 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 IL22RA2Q969J5 263 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 TMEM222Q9H0R3 208 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 PLEKHA2Q9HB19 425 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 COMMD9Q9P000 198 aa10.21□□□□□ -0.77
SCLT1-202ENST00000439369 TEX15Q9BXT5 2789 aa10.21□□□□□ -0.78
SCLT1-202ENST00000439369 A0A0B4J2A0 478 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 SNRPGP15A8MWD9 76 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 ATG12O94817 140 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 HPRT1P00492 218 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 SERPINE2P07093 398 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 VSIG10L2P0DP72 767 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 SRD5A1P18405 259 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 VAMP1P23763 118 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 LGALS7P47929 136 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 DHRS2Q13268 280 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 PPP1R1AQ13522 171 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 DEFB112Q30KQ8 113 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM177Q53S58 311 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 GLDNQ6ZMI3 551 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-202ENST00000439369 LRTM2Q8N967 370 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms