RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 RPH3ALQ9UNE2 315 aa5.1□□□□□ -1.59
SPEN-202ENST00000438066 PLCE1Q9P212 2302 aa5.1□□□□□ -1.59
SPEN-202ENST00000438066 IGKV1D-8A0A087WSZ0 117 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 K7ENP7 123 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 RRP8O43159 456 aaKnown RBP5.09□□□□□ -1.59
SPEN-202ENST00000438066 TNFSF12O43508 249 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 BUB3O43684 328 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 IGLV1-44P01699 117 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 PMP2P02689 132 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 CBR1P16152 277 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 SELEP16581 610 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 DTYMKP23919 212 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 ZBTB25P24278 435 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 PMELP40967 661 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 NPBWR2P48146 333 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 TDGF1P3P51864 188 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 H2BFSP57053 126 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 PPP1CBP62140 327 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 TSC22D1Q15714 1073 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 MPPED2Q15777 294 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 SLC35E4Q6ICL7 350 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 FAHD2BQ6P2I3 314 aaPredicted RBP5.09□□□□□ -1.59
SPEN-202ENST00000438066 SPSB3Q6PJ21 355 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 ATRAIDQ6UW56 229 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 SLC25A42Q86VD7 318 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 TMEM17Q86X19 198 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 RPRMLQ8N4K4 120 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 OR2T35Q8NGX2 323 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 TERB2Q8NHR7 220 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 FAHD2AQ96GK7 314 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 SULT4A1Q9BR01 284 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 TMEM246Q9BRR3 403 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 HDHD3Q9BSH5 251 aaPredicted RBP5.09□□□□□ -1.59
SPEN-202ENST00000438066 Q9HAA7 133 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 PLEKHJ1Q9NW61 149 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 OPN4Q9UHM6 478 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 ZNF230Q9UIE0 474 aaPredicted RBP5.09□□□□□ -1.59
SPEN-202ENST00000438066 AK3Q9UIJ7 227 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 ST3GAL6Q9Y274 331 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 MPC1Q9Y5U8 109 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 CADP27708 2225 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 CACNA1AO00555 2505 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 NCOR2Q9Y618 2525 aa5.09□□□□□ -1.59
SPEN-202ENST00000438066 ITPR1Q14643 2758 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 CHD3Q12873 2000 aaKnown RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 PDCD6O75340 191 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 IFNA6P05013 189 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 IGF1P05019 195 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 FCGR3AP08637 254 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 ZNF35P13682 527 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 BCL3P20749 454 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 TIMP3P35625 211 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 HAAOP46952 286 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 UBE2MP61081 183 aaKnown RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 FGF12P61328 243 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 ERVS71-1P61550 626 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 GNG3P63215 75 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 ARL16Q0P5N6 197 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 ECSCRQ19T08 205 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 LY6G6FQ5SQ64 297 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 AADACL3Q5VUY0 350 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 OR2T2Q6IF00 324 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 BTNL3Q6UXE8 466 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 NCCRP1Q6ZVX7 275 aaPredicted RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 TMED4Q7Z7H5 227 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 LYG2Q86SG7 212 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 ASCC1Q8N9N2 400 aaKnown RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 OR5H2Q8NGV7 314 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 OR13G1Q8NGZ3 307 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 PCNPQ8WW12 178 aaKnown RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 ASB13Q8WXK3 278 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 MAFIPQ8WZ33 124 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 FAAP24Q9BTP7 215 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 OR2J1Q9GZK6 312 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 OPN3Q9H1Y3 402 aaPredicted RBP5.09□□□□□ -1.6
SPEN-202ENST00000438066 OR51B6Q9H340 312 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 MTCH1Q9NZJ7 389 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 MGAT4AQ9UM21 535 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 PROCRQ9UNN8 238 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 PPP1R3CQ9UQK1 317 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 TP53TG5Q9Y2B4 290 aa5.09□□□□□ -1.6
SPEN-202ENST00000438066 PCNX1Q96RV3 2341 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 BTBD17A6NE02 478 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 OR5H1A6NKK0 313 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 IQCF6A8MYZ5 107 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 PRSS44E7EML9 344 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 SYNGR1O43759 233 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 HLA-AP01891 365 aaKnown RBP5.08□□□□□ -1.6
SPEN-202ENST00000438066 HOXD4P09016 255 aaPredicted RBP5.08□□□□□ -1.6
SPEN-202ENST00000438066 CECR9P0C854 216 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 FUT3P21217 361 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 UCP1P25874 307 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 SAA4P35542 130 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
SPEN-202ENST00000438066 PPP1R1AQ13522 171 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 ATXN7L3Q14CW9 347 aaPredicted RBP5.08□□□□□ -1.6
SPEN-202ENST00000438066 SSX2Q16385 188 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 FAM76BQ5HYJ3 339 aa5.08□□□□□ -1.6
SPEN-202ENST00000438066 ZNF660Q6AZW8 331 aaPredicted RBP5.08□□□□□ -1.6
SPEN-202ENST00000438066 FIP1L1Q6UN15 594 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms