RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SLC25A20O43772 301 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 ARL14EPLP0DKL9 152 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 PNLIPP16233 465 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TMIGD3P0DMS9 266 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-209ENST00000437951 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 CTLA4P16410 223 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 TRA2AQ13595 282 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTCH1-209ENST00000437951 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 SARGQ9BW04 601 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
PTCH1-209ENST00000437951 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 A8MXK9 166 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 KLKB1P03952 638 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 CTSSP25774 331 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 FCGR2BP31994 310 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 IL11RAQ14626 422 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 CXorf67Q86X51 503 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 SMIM8Q96KF7 97 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 SERGEFQ9UGK8 458 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 UBE2CO00762 179 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 SRSF4Q08170 494 aaKnown RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 C8orf88P0DMB2 117 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 AURKAIP1Q9NWT8 199 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 ASAH2BP0C7U1 165 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 ALKBH6Q3KRA9 238 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 ACER2Q5QJU3 275 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 MSRB3Q8IXL7 192 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 PRDM13Q9H4Q3 707 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 H0YL77 283 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 RRHO14718 337 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 A8MWV9 139 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 K7N7A8 449 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 GLULP15104 373 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 GPX4P36969 197 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 NUBP1P53384 320 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 RBM11P57052 281 aaKnown RBP10.04□□□□□ -0.8
PTCH1-209ENST00000437951 MDP1Q86V88 176 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 PRSS27Q9BQR3 290 aa10.04□□□□□ -0.8
PTCH1-209ENST00000437951 OR2A4O95047 310 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 OR2A7Q96R45 310 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 GMLQ99445 158 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 ZFP64Q9NPA5 681 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 MMP17Q9ULZ9 603 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 ERGP11308 486 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 GDF9O60383 454 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 HOXC4P09017 264 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-209ENST00000437951 OVOL2Q9BRP0 275 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 CRISPLD2Q9H0B8 497 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 MEGF9Q9H1U4 602 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 LOXL2Q9Y4K0 774 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 A0A1B0GTH9 108 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 C17orf99Q6UX52 265 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 CX3CL1P78423 397 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 APCDD1LQ8NCL9 501 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 MARS2Q96GW9 593 aaKnown RBP10.03□□□□□ -0.8
PTCH1-209ENST00000437951 COL16A1Q07092 1604 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-209ENST00000437951 MEX3AA1L020 520 aaKnown RBP10.03□□□□□ -0.8
PTCH1-209ENST00000437951 CACNG7P62955 275 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 EFNB1P98172 346 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 FMC1Q96HJ9 113 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 ST20Q9HBF5 79 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 ST6GALNAC2Q9UJ37 374 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 DOCK1Q14185 1865 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 VSIG8P0DPA2 414 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 PNKDQ8N490 385 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 OR11G2Q8NGC1 345 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
PTCH1-209ENST00000437951 NOTCH3Q9UM47 2321 aa10.02□□□□□ -0.8
PTCH1-209ENST00000437951 DNM1P46Q6ZS02 220 aa10.02□□□□□ -0.8
PTCH1-209ENST00000437951 ISG15P05161 165 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 KIAA0040Q15053 153 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 C8orf82Q6P1X6 216 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-209ENST00000437951 BHLHA15Q7RTS1 189 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-209ENST00000437951 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-209ENST00000437951 GCSAMQ8N6F7 178 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 LRTM2Q8N967 370 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 PRR13Q9NZ81 148 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 IGLV3-16A0A075B6K0 115 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 TRAV17A0A0B4J275 112 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 SRFP11831 508 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 NPFFO15130 113 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 CLDN14O95500 239 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-209ENST00000437951 AQP3Q92482 292 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms