RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 HPRT1P00492 218 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 RAB7AP51149 207 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 TBR1Q16650 682 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 AWAT1Q58HT5 328 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 R3HDM4Q96D70 268 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 DIRC2Q96SL1 478 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 RARRES2Q99969 163 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 FAM234AQ9H0X4 552 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 GAB2Q9UQC2 676 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF835Q9Y2P0 537 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 TIMM9Q9Y5J7 89 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
LIMK1-203ENST00000435201 CGB3P0DN86 165 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 CGB7P0DN87 165 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 IRF2P14316 349 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 SOHLH1Q5JUK2 328 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF506Q5JVG8 444 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 NCR3LG1Q68D85 454 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
LIMK1-203ENST00000435201 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 CLN8Q9UBY8 286 aa13.87□□□□□ -0.19
LIMK1-203ENST00000435201 TRGV10A0A0A0MS01 117 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 M0R036 132 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 M0R1X1 148 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 OR13C7P0DN81 318 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 RHEBQ15382 184 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 C17orf58Q2M2W7 97 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 FAM201AQ5SY85 155 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 WFDC8Q8IUA0 241 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 CLDND2Q8NHS1 167 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF665Q9H7R5 613 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
LIMK1-203ENST00000435201 KBTBD11-OT1A0A1B0GTJ5 212 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 UBE2L5PA0A1B0GUS4 154 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 K7ENP7 123 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 ZG16O60844 167 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 FCGR3BO75015 233 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 PROP1O75360 226 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 CYB5R3P00387 301 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-203ENST00000435201 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
LIMK1-203ENST00000435201 CTRB1P17538 263 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 TMEM30BQ3MIR4 351 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 AARDQ4LEZ3 155 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 C15orf54Q8N8G6 183 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 MBD3L1Q8WWY6 194 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 GAFA1Q96PS6 74 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 GFOD1Q9NXC2 390 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 MLXQ9UH92 298 aa13.85□□□□□ -0.19
LIMK1-203ENST00000435201 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-203ENST00000435201 C7orf77A4D0Y5 90 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 CEBPZOSA8MTT3 80 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 CD55P08174 381 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 TNFRSF1AP19438 455 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 LINC00205P59089 165 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 ICAM4Q14773 271 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 HAGHQ16775 308 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 TEX36Q5VZQ5 186 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF788Q6ZQV5 615 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-203ENST00000435201 BOD1L1Q8NFC6 3051 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 PMS2P5A8MQ11 134 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
LIMK1-203ENST00000435201 SRP19P09132 144 aaKnown RBP13.84□□□□□ -0.19
LIMK1-203ENST00000435201 SELLP14151 372 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 ZNF134P52741 427 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 ERVK-16P61578 105 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 CENPVQ7Z7K6 275 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-203ENST00000435201 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 PLPPR2Q96GM1 343 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 S1PR3Q99500 378 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 SCNM1Q9BWG6 230 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 TUBA4BQ9H853 241 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 DSCAMO60469 2012 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 TANC2Q9HCD6 1990 aa13.84□□□□□ -0.19
LIMK1-203ENST00000435201 RAI1Q7Z5J4 1906 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-203ENST00000435201 DSCAML1Q8TD84 2053 aa13.83□□□□□ -0.19
LIMK1-203ENST00000435201 LAMA5O15230 3695 aa13.83□□□□□ -0.19
LIMK1-203ENST00000435201 DPRXA6NFQ7 191 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 RBPJQ06330 500 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 RPL39P5Q59GN2 51 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 AVPI1Q5T686 147 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF787Q6DD87 383 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 ZDHHC16Q969W1 377 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 AIFM2Q9BRQ8 373 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 SH3BGRL2Q9UJC5 107 aa13.83□□□□□ -0.2
LIMK1-203ENST00000435201 DIDO1Q9BTC0 2240 aaKnown RBP13.83□□□□□ -0.2
LIMK1-203ENST00000435201 LOC102723971A0A1B0GUV8 181 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF729A6NN14 1252 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms