RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HBEGFQ99075 208 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 ZNF251Q9BRH9 671 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 DCUN1D5Q9BTE7 237 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 MFSD1Q9H3U5 465 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 C1orf109Q9NX04 203 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 TAS2R13Q9NYV9 303 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 POMPQ9Y244 141 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 COL27A1Q8IZC6 1860 aaPredicted RBP3.34□□□□□ -1.87
USP54-206ENST00000433394 PLXNA1Q9UIW2 1896 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 TICRRQ7Z2Z1 1910 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 IGHV3-21A0A0B4J1V1 117 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 GNG14A0A1W2PPG7 69 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 EFCAB10A6NFE3 127 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 EFCAB9A8MZ26 197 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 RAB36O95755 333 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 PET100P0DJ07 73 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 CELP19835 753 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 SNRPFP62306 86 aaKnown RBP3.33□□□□□ -1.88
USP54-206ENST00000433394 ARF6P62330 175 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 TSPAN31Q12999 210 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 SMCO1Q147U7 214 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 PDK2Q15119 407 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 AKIRIN2Q53H80 203 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 FAM162BQ5T6X4 162 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 CCDC42Q96M95 316 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 PLA2G12AQ9BZM1 189 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 VSIRQ9H7M9 311 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 ASCL3Q9NQ33 180 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 RBM12B-AS1Q9P1G2 102 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 ERGIC3Q9Y282 383 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
USP54-206ENST00000433394 MYH11P35749 1972 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 FABP12A6NFH5 140 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 TMEM114B3SHH9 223 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 D6RAR5 112 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 F5H5P2 479 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 TOX3O15405 576 aaPredicted RBP3.32□□□□□ -1.88
USP54-206ENST00000433394 DHFRP00374 187 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 HLA-AP01891 365 aaKnown RBP3.32□□□□□ -1.88
USP54-206ENST00000433394 LIMS3P0CW19 117 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 LIMS4P0CW20 117 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 SPCS3P61009 180 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 EXOC3L4Q17RC7 722 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 CST9Q5W186 159 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 SLC25A45Q8N413 288 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 ZFP62Q8NB50 900 aaPredicted RBP3.32□□□□□ -1.88
USP54-206ENST00000433394 OR5D18Q8NGL1 313 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 ZNF436Q9C0F3 470 aaPredicted RBP3.32□□□□□ -1.88
USP54-206ENST00000433394 TXNIPQ9H3M7 391 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 DHX35Q9H5Z1 703 aaKnown RBP3.32□□□□□ -1.88
USP54-206ENST00000433394 DMAC2Q9NW81 257 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 Q9Y3F1 56 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 PLXNB2O15031 1838 aa3.32□□□□□ -1.88
USP54-206ENST00000433394 DOCK3Q8IZD9 2030 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 MGAMO43451 1857 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 TMEM213A2RRL7 107 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 TCF21O43680 179 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 CA2P00918 260 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 CTXN2P0C2S0 81 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 OCM2P0CE71 109 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 F8A1P23610 371 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 CDK9P50750 372 aaKnown RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 MYL5Q02045 173 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 PAFAH1B3Q15102 231 aaKnown RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 LGALSLQ3ZCW2 172 aaPredicted RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 TMEM25Q86YD3 366 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 CLVS1Q8IUQ0 354 aaPredicted RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 GID4Q8IVV7 300 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 DYNC2LI1Q8TCX1 351 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 FAM172AQ8WUF8 416 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 PYURFQ96I23 114 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 OR2V2Q96R30 315 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 UGT2B28Q9BY64 529 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 PARD6GQ9BYG4 376 aaPredicted RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 ABCG5Q9H222 651 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 POLR3HQ9Y535 204 aaPredicted RBP3.31□□□□□ -1.88
USP54-206ENST00000433394 MCM3APO60318 1980 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 TRIP11Q15643 1979 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 LCTP09848 1927 aa3.31□□□□□ -1.88
USP54-206ENST00000433394 LRRC37A2A6NM11 1700 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 COL1A2P08123 1366 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 IGHV3-43A0A0B4J1X8 118 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 C9J4A7 227 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 MKRN2OSH3BPM6 223 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 NOS1APO75052 506 aaPredicted RBP3.3□□□□□ -1.88
USP54-206ENST00000433394 POP7O75817 140 aaKnown RBP3.3□□□□□ -1.88
USP54-206ENST00000433394 IGHG2P01859 326 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 GP1BAP07359 652 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 ZNF7P17097 686 aaPredicted RBP3.3□□□□□ -1.88
USP54-206ENST00000433394 SERPINB1P30740 379 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 ACTBP60709 375 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 CXCR4P61073 352 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 ACTG1P63261 375 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 IL15RAQ13261 267 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 SLAMF1Q13291 335 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 ZBTB6Q15916 424 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms