RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PARD6GQ9BYG4 376 aaPredicted RBP10.66□□□□□ -0.7
DDX56-204ENST00000431640 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
DDX56-204ENST00000431640 ZNF665Q9H7R5 613 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 IGHV3-43A0A0B4J1X8 118 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 FAM90A27PA6NNH2 459 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 FAM90A9PA6NNJ1 464 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 C17orf98A8MV24 154 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 RAMP3O60896 148 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 HBE1P02100 147 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 CD55P08174 381 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 IGHV3-43DP0DP04 118 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 EDDM3BP56851 147 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 ZNF816Q0VGE8 651 aaPredicted RBP10.65□□□□□ -0.7
DDX56-204ENST00000431640 GUCA2BQ16661 112 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 WFDC8Q8IUA0 241 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 ZNF295-AS1Q8N0V1 137 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 RBKSQ9H477 322 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 KCNJ16Q9NPI9 418 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 PRR14LQ5THK1 2151 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 ARID1AO14497 2285 aa10.65□□□□□ -0.7
DDX56-204ENST00000431640 CHD3Q12873 2000 aaKnown RBP10.65□□□□□ -0.7
DDX56-204ENST00000431640 TRGV10A0A0A0MS01 117 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 LOC105371267A0A1B0GV96 52 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 SIGLEC5O15389 551 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 ST8SIA5O15466 376 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 RBFOX2O43251 390 aaKnown RBP eCLIP10.65□□□□□ -0.717e-8■□□□□ 9
DDX56-204ENST00000431640 ZG16O60844 167 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 HPRT1P00492 218 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 H2AFB1P0C5Y9 115 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 CGB3P0DN86 165 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 CGB7P0DN87 165 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 IAPPP10997 89 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.71
DDX56-204ENST00000431640 G6PCP35575 357 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 SERF2P84101 59 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 Q3ZCU0 254 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 SPRNQ5BIV9 151 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 STUMQ69YW2 141 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 C5orf30Q96GV9 206 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.71
DDX56-204ENST00000431640 DCTN5Q9BTE1 182 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 CALYQ9NYX4 217 aa10.65□□□□□ -0.71
DDX56-204ENST00000431640 FAM208BQ5VWN6 2430 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 FLNCQ14315 2725 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 DPRXA6NFQ7 191 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 FAM157AC9JC47 383 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 H3BP45 60 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 S1PR2O95136 353 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 CHRNB4P30926 498 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 FHITP49789 147 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 LOXL3P58215 753 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 BRWD1-AS2P59051 145 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 TFF3Q07654 80 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 TMEM267Q0VDI3 215 aaPredicted RBP10.64□□□□□ -0.71
DDX56-204ENST00000431640 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 SPANXN5Q5MJ07 72 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 TEX36Q5VZQ5 186 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 DHRS7BQ6IAN0 325 aaPredicted RBP10.64□□□□□ -0.71
DDX56-204ENST00000431640 BTNL3Q6UXE8 466 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 TMEM14EPQ6UXP3 125 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 THNSL2Q86YJ6 484 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.64□□□□□ -0.71
DDX56-204ENST00000431640 ITLN2Q8WWU7 325 aaPredicted RBP10.64□□□□□ -0.71
DDX56-204ENST00000431640 CORO2AQ92828 525 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 RBMXL1Q96E39 390 aaKnown RBP10.64□□□□□ -0.71
DDX56-204ENST00000431640 EGLN1Q9GZT9 426 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 PRELID3BQ9Y3B1 194 aa10.64□□□□□ -0.71
DDX56-204ENST00000431640 KBTBD11-OT1A0A1B0GTJ5 212 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 OR4A8P0C604 315 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 METTL15P1P0C7V9 234 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 ATF4P18848 351 aaPredicted RBP10.63□□□□□ -0.71
DDX56-204ENST00000431640 SRSF1Q07955 248 aaKnown RBP eCLIP10.63□□□□□ -0.714e-7■□□□□ 8.4
DDX56-204ENST00000431640 OR2B11Q5JQS5 317 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 FAM53AQ6NSI3 398 aaPredicted RBP10.63□□□□□ -0.71
DDX56-204ENST00000431640 ZNF788Q6ZQV5 615 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 ZNF525Q8N782 197 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 SLC35B3Q9H1N7 401 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 UNKLQ9H9P5 680 aaKnown RBP10.63□□□□□ -0.71
DDX56-204ENST00000431640 CLN8Q9UBY8 286 aa10.63□□□□□ -0.71
DDX56-204ENST00000431640 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 ZNF729A6NN14 1252 aaPredicted RBP10.62□□□□□ -0.71
DDX56-204ENST00000431640 LINC00473A8K010 186 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 NUPL2O15504 423 aaKnown RBP10.62□□□□□ -0.71
DDX56-204ENST00000431640 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
DDX56-204ENST00000431640 THBDP07204 575 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 PPT1P50897 306 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 ADIPOQQ15848 244 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 LTC4SQ16873 150 aa10.62□□□□□ -0.71
DDX56-204ENST00000431640 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms