RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CENPVQ7Z7K6 275 aaPredicted RBP11.55□□□□□ -0.56
HOXC4-202ENST00000430889 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 RSG1Q9BU20 258 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
HOXC4-202ENST00000430889 OR6C3Q9NZP0 311 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 FBXO7Q9Y3I1 522 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 ATMQ13315 3056 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
HOXC4-202ENST00000430889 CD55P08174 381 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 PTAFRP25105 342 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 GPR12P47775 334 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 SELENOVP59797 346 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 SPANXN5Q5MJ07 72 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 UTF1Q5T230 341 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
HOXC4-202ENST00000430889 TMEM108Q6UXF1 575 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 ZNF788Q6ZQV5 615 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 DDB2Q92466 427 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 RARRES2Q99969 163 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
HOXC4-202ENST00000430889 ACACAQ13085 2346 aa11.55□□□□□ -0.56
HOXC4-202ENST00000430889 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
HOXC4-202ENST00000430889 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 GFRALQ6UXV0 394 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
HOXC4-202ENST00000430889 MBD3L1Q8WWY6 194 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 FAM234AQ9H0X4 552 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 GFOD1Q9NXC2 390 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
HOXC4-202ENST00000430889 DMXL2Q8TDJ6 3036 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 KBTBD11-OT1A0A1B0GTJ5 212 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 A0A1B0GV50 99 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 SLC31A2O15432 143 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 ZG16O60844 167 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 CYB5R3P00387 301 aaPredicted RBP11.53□□□□□ -0.56
HOXC4-202ENST00000430889 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 SERF2P84101 59 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 TLE4Q04727 773 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 ICAM4Q14773 271 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 ADIPOQQ15848 244 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 LTC4SQ16873 150 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 VWC2Q2TAL6 325 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
HOXC4-202ENST00000430889 PRR30Q53SZ7 412 aaPredicted RBP11.53□□□□□ -0.56
HOXC4-202ENST00000430889 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 H2BFWTQ7Z2G1 175 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 ZNF439Q8NDP4 499 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 SCGB1C1Q8TD33 95 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 CORO2AQ92828 525 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 R3HDM4Q96D70 268 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 SNRNP40Q96DI7 357 aaKnown RBP11.53□□□□□ -0.56
HOXC4-202ENST00000430889 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
HOXC4-202ENST00000430889 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 CLN8Q9UBY8 286 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 TIMM9Q9Y5J7 89 aa11.53□□□□□ -0.56
HOXC4-202ENST00000430889 COLCA2A8K830 154 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 GFRA3O60609 400 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 HPRT1P00492 218 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 HBE1P02100 147 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.56
HOXC4-202ENST00000430889 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.56
HOXC4-202ENST00000430889 TNFSF4P23510 183 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 EDDM3BP56851 147 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 AWAT1Q58HT5 328 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 DTD1Q8TEA8 209 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.56
HOXC4-202ENST00000430889 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 EGLN1Q9GZT9 426 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 DCAF16Q9NXF7 216 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 ICE1Q9Y2F5 2266 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
HOXC4-202ENST00000430889 PIEZO1Q92508 2521 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
HOXC4-202ENST00000430889 HSPB1P04792 205 aaKnown RBP11.52□□□□□ -0.57
HOXC4-202ENST00000430889 ATP6V1FQ16864 119 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 RPL39P5Q59GN2 51 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 CT45A1Q5HYN5 189 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 LILRB2Q8N423 598 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.52□□□□□ -0.57
HOXC4-202ENST00000430889 CT45A3Q8NHU0 189 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.57
HOXC4-202ENST00000430889 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 AIFM2Q9BRQ8 373 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
HOXC4-202ENST00000430889 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms