RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TCTAP57738 103 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 FAM74A4Q5TZK3 123 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 FAM27BQ5VT28 67 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 ZAR1Q86SH2 424 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM183AQ8IXX5 376 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 ABHD12Q8N2K0 398 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 CLEC7AQ9BXN2 247 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM74BQ9NUR3 256 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 NPIPB11E5RHQ5 1161 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 UPK3AO75631 287 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 CYB5R3P00387 301 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-208ENST00000428599 PLPPR5Q32ZL2 321 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 C11orf91Q3C1V1 193 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 AQP10Q96PS8 301 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 TLNRD1Q9H1K6 362 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 H7C1H1 209 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 MFAP2P55001 183 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM30BQ3MIR4 351 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 SIGIRRQ6IA17 410 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 TPRX1Q8N7U7 411 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 LINC00469Q8N7U9 141 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 GPR61Q9BZJ8 451 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 IGHV3OR16-10A0A075B7F0 116 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 A1L4Q6 167 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 MMP9P14780 707 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 DNLZQ5SXM8 178 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 OR9G1Q8NH87 305 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 ABHD1Q96SE0 405 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 DSPPQ9NZW4 1301 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 OR2H2O95918 312 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 MVDP53602 400 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 PSG4Q00888 419 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 GCSAMLQ5JQS6 135 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 LSM10Q969L4 123 aaKnown RBP7.72□□□□□ -1.17
CTNND1-208ENST00000428599 MRPL13Q9BYD1 178 aaKnown RBP7.72□□□□□ -1.17
CTNND1-208ENST00000428599 DTX4Q9Y2E6 619 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 IGKV1-8A0A0C4DH67 115 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 A0A0J9YW62 118 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 SYNGR3O43761 229 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 CEACAM4O75871 244 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 FCGR3AP08637 254 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 ASAH2BP0C7U1 165 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 LTBRP36941 435 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 FGF12P61328 243 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 ZP4Q12836 540 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 HOGA1Q86XE5 327 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM70Q9BUB7 260 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 PGPA6NDG6 321 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM186Q96B77 213 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 CALYQ9NYX4 217 aa7.71□□□□□ -1.17
CTNND1-208ENST00000428599 SLC25A17O43808 307 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 RND2P52198 227 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 ST6GALNAC2Q9UJ37 374 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 GDF9O60383 454 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 ISG15P05161 165 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 HIST1H1AQ02539 215 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-208ENST00000428599 RSPO4Q2I0M5 234 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-208ENST00000428599 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
CTNND1-208ENST00000428599 A0A0U1RQV5 110 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 TRGV3P03979 118 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 ITLN2Q8WWU7 325 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-208ENST00000428599 HIST1H4GQ99525 98 aa7.71□□□□□ -1.18
CTNND1-208ENST00000428599 MYOFQ9NZM1 2061 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 WISP3O95389 354 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-208ENST00000428599 CELA2AP08217 269 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 HTN3P15516 51 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 SSTR5P35346 364 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 MMP16P51512 607 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 MGAT2Q10469 447 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PNKDQ8N490 385 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 OR4C13Q8NGP0 309 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 IFT22Q9H7X7 185 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 TNFRSF18Q9Y5U5 241 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 A0A0G2JLM5 398 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 H0Y980 276 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 SERF2P84101 59 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 FXYD3Q14802 87 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 CFAP161Q6P656 301 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 OR4D11Q8NGI4 311 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 TXNDC17Q9BRA2 123 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PEMTQ9UBM1 199 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 TDRD6O60522 2096 aaKnown RBP7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 DIRC3C9JPN6 131 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PTP4A3O75365 173 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 FGF5P12034 268 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PILRAQ9UKJ1 303 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 H3BQ15 152 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 MT-ND6P03923 174 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 ZNF25P17030 456 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-208ENST00000428599 C10orf128Q5T292 105 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 QTRT1Q9BXR0 403 aaKnown RBP7.7□□□□□ -1.18
CTNND1-208ENST00000428599 PGPEP1Q9NXJ5 209 aa7.7□□□□□ -1.18
CTNND1-208ENST00000428599 NPIPB8E9PQR5 432 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 PLAUP00749 431 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms