RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 ZNF721Q8TF20 911 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
PTPRU-204ENST00000428026 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 MDP1Q86V88 176 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 RAB1CQ92928 201 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
PTPRU-204ENST00000428026 TMEM189A5PLL7 270 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 SELENOHQ8IZQ5 122 aaKnown RBP12.49□□□□□ -0.41
PTPRU-204ENST00000428026 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 HYPMO75409 117 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 PGLYRP1O75594 196 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-204ENST00000428026 HPRT1P00492 218 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 LINC00869P0C866 280 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 MTURNQ8N3F0 131 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-204ENST00000428026 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 IGKV1-8A0A0C4DH67 115 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 SHISA3A0PJX4 238 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 B4E171 279 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-204ENST00000428026 TSPAN7P41732 249 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 PSG4Q00888 419 aa12.49□□□□□ -0.41
PTPRU-204ENST00000428026 PQLC2LA1A4F0 135 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 F2RL2O00254 374 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
PTPRU-204ENST00000428026 AMY1AP04745 511 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 NGFRP08138 427 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 ARL14EPLP0DKL9 152 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CKS2P33552 79 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CEACAM18A8MTB9 384 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 NKX2-8O15522 239 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CA11O75493 328 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 LAMTOR1Q6IAA8 161 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 PGPA6NDG6 321 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 NPIPB9F8W1W9 429 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
PTPRU-204ENST00000428026 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 P2RX4Q99571 388 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 LIFP15018 202 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 NUBP1P53384 320 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CRIPAKQ8N1N5 446 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 GFRA1P56159 465 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 FGFRL1Q8N441 504 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 QTRT1Q9BXR0 403 aaKnown RBP12.48□□□□□ -0.41
PTPRU-204ENST00000428026 RABAC1Q9UI14 185 aa12.48□□□□□ -0.41
PTPRU-204ENST00000428026 IGHV3-72A0A0B4J1Y9 119 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 SCGB1A1P11684 91 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 CRYBB3P26998 211 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 MMDQ15546 238 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 OR8G5Q8NG78 346 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 LSM10Q969L4 123 aaKnown RBP12.47□□□□□ -0.41
PTPRU-204ENST00000428026 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 H3BTX0 84 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 CBLN1P23435 193 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 UCNP55089 124 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 RTP5Q14D33 572 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 TEX30Q5JUR7 227 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 HCP5Q6MZN7 132 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 ZDHHC8Q9ULC8 765 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 FOLR2P14207 255 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 OR8B2Q96RD0 313 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 WNT10AQ9GZT5 417 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 HSPB7Q9UBY9 170 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 CGB1A6NKQ9 187 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 ZG16O60844 167 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 PRDX2P32119 198 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 FGF12P61328 243 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 LRRC75BQ2VPJ9 315 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 FAM181AQ8N9Y4 354 aa12.47□□□□□ -0.41
PTPRU-204ENST00000428026 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
PTPRU-204ENST00000428026 MSGN1A6NI15 193 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 ADIPOQQ15848 244 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 DICER1Q9UPY3 1922 aaKnown RBP12.46□□□□□ -0.41
PTPRU-204ENST00000428026 SVILO95425 2214 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 A0A0J9YW62 118 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 C2orf68Q2NKX9 166 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 NCOR1O75376 2440 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 OR2H2O95918 312 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 VWCEQ96DN2 955 aa12.46□□□□□ -0.41
PTPRU-204ENST00000428026 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.42
PTPRU-204ENST00000428026 CD3EP07766 207 aa12.46□□□□□ -0.42
PTPRU-204ENST00000428026 CSRP2Q16527 193 aa12.46□□□□□ -0.42
PTPRU-204ENST00000428026 CEACAM21Q3KPI0 293 aa12.46□□□□□ -0.42
PTPRU-204ENST00000428026 POC1AQ8NBT0 407 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms