RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
PKP4-205ENST00000426248 WNT10AQ9GZT5 417 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 RAXQ9Y2V3 346 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 TTRP02766 147 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 ECI1P42126 302 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 CDKN1BP46527 198 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 MSMO1Q15800 293 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 SPATA46Q5T0L3 261 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 FAM58AQ8N1B3 248 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 OR1F12Q8NHA8 337 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 LHFPL6Q9Y693 200 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 MTCP1P56278 107 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
PKP4-205ENST00000426248 IL15RAQ13261 267 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 FBLN7Q53RD9 439 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 SLC25A47Q6Q0C1 308 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 OR5AS1Q8N127 324 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 OR6C3Q9NZP0 311 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 CELSR3Q9NYQ7 3312 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 KIR2DL5BA0A0G2JN68 375 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 KIR2DL5BA0A0G2JPC4 375 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 TMEM14DPA8MWL7 114 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 A8MXE2 369 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 PITX3O75364 302 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 EGR1P18146 543 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 S100GP29377 79 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 CDKN1AP38936 164 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 RND2P52198 227 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 ZNF90Q03938 601 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 PHYHD1Q5SRE7 291 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 PLCXD3Q63HM9 321 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 KIR2DL5AQ8N109 375 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 RNF133Q8WVZ7 376 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 BCL2L2Q92843 193 aaPredicted RBP13.62□□□□□ -0.23
PKP4-205ENST00000426248 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 AADACP22760 399 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 UCP2P55851 309 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 RNFT1Q5M7Z0 435 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 MRPL30Q8TCC3 161 aaKnown RBP13.62□□□□□ -0.23
PKP4-205ENST00000426248 TMEM171Q8WVE6 324 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 ANXA10Q9UJ72 324 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 PROCRQ9UNN8 238 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 EML6Q6ZMW3 1958 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 MDFIC2A0A1B0GVS7 189 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 DUXBA0A1W2PPF3 345 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 GYPAP02724 150 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 DTYMKP23919 212 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 SELENOTP62341 195 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 G6PC2Q9NQR9 355 aa13.62□□□□□ -0.23
PKP4-205ENST00000426248 CIDEAO60543 219 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 LHX2P50458 406 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 RBPJQ06330 500 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 UBE2V1Q13404 147 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 GGNQ86UU5 652 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 TMEM38BQ9NVV0 291 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 A0A1B0GW64 132 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 CDS2O95674 445 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 LYG1Q8N1E2 194 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 OR8B12Q8NGG6 310 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 UQCR10Q9UDW1 63 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 SETD2Q9BYW2 2564 aaPredicted RBP13.61□□□□□ -0.23
PKP4-205ENST00000426248 RNF212BA8MTL3 300 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 KISS1Q15726 138 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 H1FOOQ8IZA3 346 aaPredicted RBP13.61□□□□□ -0.23
PKP4-205ENST00000426248 OR51G1Q8NGK1 321 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 MOB3AQ96BX8 217 aa13.61□□□□□ -0.23
PKP4-205ENST00000426248 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 HTD2P86397 168 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 FFAR4Q5NUL3 377 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 DOK3Q7L591 496 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 KITLGP21583 273 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 CLDN18P56856 261 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 TMEM187Q14656 261 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 FDX2Q6P4F2 183 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 SGMS2Q8NHU3 365 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 BORCS7Q96B45 105 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 MRPL13Q9BYD1 178 aaKnown RBP13.6□□□□□ -0.23
PKP4-205ENST00000426248 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
PKP4-205ENST00000426248 DKK1O94907 266 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 IGHMP01871 453 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 PAX1P15863 534 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 TAS2R30P59541 319 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 ROM1Q03395 351 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 MDS2Q8NDY4 140 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 DUSP13Q9UII6 198 aa13.6□□□□□ -0.23
PKP4-205ENST00000426248 FREM1Q5H8C1 2179 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 CDC34P49427 236 aaPredicted RBP13.59□□□□□ -0.23
PKP4-205ENST00000426248 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 C1QL2Q7Z5L3 287 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 MRGPRGQ86SM5 289 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 LHFPL1Q86WI0 220 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 PARLQ9H300 379 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 NUPR1O60356 82 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 CRYAAP02489 173 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 B3GALT5-AS1P59052 145 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms