RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ABI3Q9P2A4 366 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 MED13Q9UHV7 2174 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 LRRC30A6NM36 301 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 C12orf77C9JDV5 145 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 HAND1O96004 215 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 GZMBP10144 247 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 PPP1CBP62140 327 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 TBC1D28Q2M2D7 210 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 GCSAMLQ5JQS6 135 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 H2BFWTQ7Z2G1 175 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 OR2T10Q8NGZ9 312 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 KIAA1549Q9HCM3 1950 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 NPIPB11E5RHQ5 1161 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 SOX15O60248 233 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 PMS2P11Q13670 270 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 SLC25A40Q8TBP6 338 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 NANOS1Q8WY41 292 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 BCL2L2Q92843 193 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 HSPB7Q9UBY9 170 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 SVILO95425 2214 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 A0A0U1RQK1 487 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 C11orf94C9JXX5 98 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM250H0YL14 139 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 HRASP01112 189 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 HBZP02008 142 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 NDUFB7P17568 137 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 MEOX1P50221 254 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 NUBP1P53384 320 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 EDDM3BP56851 147 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 UBE2NP61088 152 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 SLC10A1Q14973 349 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FAM78BQ5VT40 261 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FBXW9Q5XUX1 488 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF664Q8N3J9 261 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF645Q8N7E2 425 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM204Q9BSN7 226 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 STRADBQ9C0K7 418 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FAM234AQ9H0X4 552 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 TRAV38-1A0A0B4J264 116 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM30CPA0ZSE6 113 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 LYZL6O75951 148 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 IGHV3-13P01766 116 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 IGHV3-7P01780 117 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 MBP02144 154 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 HNF1AP20823 631 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 CATR1Q13166 79 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 Q8IYB0 196 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 GCNT2Q8N0V5 402 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 C5orf30Q96GV9 206 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 NPCDR1Q9BY65 106 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FOXJ2Q9P0K8 574 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 FZR1Q9UM11 496 aa6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 RP1L1Q8IWN7 2480 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF320A2RRD8 509 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 IFNL4K9M1U5 179 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 DVL1O14640 695 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 SNRPCP09234 159 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 HOXA6P31267 233 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 MPLP40238 635 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 MRPL49Q13405 166 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ATP6V1FQ16864 119 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 DCAF10Q5QP82 559 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 FIP1L1Q6UN15 594 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 AGMATQ9BSE5 352 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PRO3102Q9H379 93 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PATZ1Q9HBE1 687 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PSG11Q9UQ72 335 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 TIMM9Q9Y5J7 89 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 NPPCP23582 126 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 SSTR5P35346 364 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 CDC34P49427 236 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ERVK11-1P61568 191 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 GNB2P62879 340 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ARG2P78540 354 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PSG7Q13046 419 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 Q3ZCU0 254 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ALKBH2Q6NS38 261 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 DMRTC2Q8IXT2 367 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 DCTN5Q9BTE1 182 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 WIPI2Q9Y4P8 454 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 A0A1W2PPV4 95 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 C9orf172C9J069 976 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 NDUFB4O95168 129 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ATP5G3P48201 142 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 EDDM3AQ14507 147 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF146Q15072 292 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 TMPRSS7Q7RTY8 843 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 OR5R1Q8NH85 324 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 PYGO2Q9BRQ0 406 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms