RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CLEC2DQ9UHP7 191 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 DNAH9Q9NYC9 4486 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TRBV6-6A0A0A6YYG2 114 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 NAPSAO96009 420 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PQLC1Q8N2U9 271 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 DHRSXQ8N5I4 330 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ADTRPQ96IZ2 230 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HARBI1Q96MB7 349 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TM2D1Q9BX74 207 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PLGRKTQ9HBL7 147 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 S100A14Q9HCY8 104 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C12orf4Q9NQ89 552 aa9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
HLA-DQB3-203ENST00000425319 MSGN1A6NI15 193 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TRDCB7Z8K6 153 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 LALBAP00709 142 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CSN3P07498 182 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR9G9P0C7N8 305 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 GSTT2P0CG29 244 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 GSTT2BP0CG30 244 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SRMP19623 302 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HSD17B12Q53GQ0 312 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RNLSQ5VYX0 342 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR56B1Q8NGI3 324 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR6M1Q8NGM8 313 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR10J5Q8NHC4 309 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 GGHQ92820 318 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HIPK2Q9H2X6 1198 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PLEKHA3Q9HB20 300 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RDH8Q9NYR8 311 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HSF4Q9ULV5 492 aa9.34□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DPPA5A6NC42 116 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 IGKV1-16P04430 117 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CD3GP09693 182 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PSMD7P51665 324 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TNXAQ16473 311 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR10K2Q6IF99 312 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR4A4PQ8NGN8 299 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ACOT12Q8WYK0 555 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DCUN1D5Q9BTE7 237 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 Q9N2K0 584 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR1A1Q9P1Q5 309 aa9.33□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DHFRP00374 187 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SCTP09683 121 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 IL34Q6ZMJ4 242 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CEACAM19Q7Z692 300 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ZNF383Q8NA42 475 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 GINS4Q9BRT9 223 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SRD5A3Q9H8P0 318 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 AK3Q9UIJ7 227 aa9.32□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 BET1O15155 118 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 GGCTO75223 188 aaKnown RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ARL6IP5O75915 188 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 NDUFB8O95169 186 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LY6G6CO95867 125 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 GADD45AP24522 165 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TALDO1P37837 337 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RHOGP84095 191 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TRAM1Q15629 374 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SSX1Q16384 188 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CD300EQ496F6 205 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TMEM177Q53S58 311 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PACRGLQ8N7B6 248 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 NECAP1Q8NC96 275 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ADAD2Q8NCV1 583 aaKnown RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 NICN1Q9BSH3 213 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SCN3BQ9NY72 215 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PRELID3BQ9Y3B1 194 aa9.31□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SOCS1O15524 211 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 KIR2DS2P43631 304 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 UBE2KP61086 200 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms