RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 NUP50Q9UKX7 468 aa12.91□□□□□ -0.34
ABCA1-203ENST00000423487 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
ABCA1-203ENST00000423487 C3orf85A0A1B0GTC6 90 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 LINC00473A8K010 186 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
ABCA1-203ENST00000423487 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
ABCA1-203ENST00000423487 SSX2Q16385 188 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 GLDNQ6ZMI3 551 aaPredicted RBP12.9□□□□□ -0.34
ABCA1-203ENST00000423487 TCTEX1D1Q8N7M0 179 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 GALNT14Q96FL9 552 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
ABCA1-203ENST00000423487 HILPDAQ9Y5L2 63 aa12.9□□□□□ -0.34
ABCA1-203ENST00000423487 IGHV1-3A0A0C4DH29 117 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 H0Y980 276 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 SFT2D2O95562 160 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
ABCA1-203ENST00000423487 KIR2DS2P43631 304 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
ABCA1-203ENST00000423487 DHRS2Q13268 280 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 LYG2Q86SG7 212 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 ZNF383Q8NA42 475 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 CD300LFQ8TDQ1 290 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM160Q9NX00 188 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 FAM96BQ9Y3D0 163 aa12.89□□□□□ -0.35
ABCA1-203ENST00000423487 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 C9orf170A2RU37 121 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 LY6G6DO95868 133 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 IFNA2P01563 188 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 APOA2P02652 100 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 HNF1AP20823 631 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 MC5RP33032 325 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 LINC00205P59089 165 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 FAM120AOSQ5T036 256 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 MOB3BQ86TA1 216 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 OR5AN1Q8NGI8 311 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 DDB2Q92466 427 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SMR3AQ99954 134 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 FAM212BQ9NTI7 297 aaPredicted RBP12.88□□□□□ -0.35
ABCA1-203ENST00000423487 OTOGQ6ZRI0 2925 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 RRASP10301 218 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 CBX3Q13185 183 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SLC9A3R2Q15599 337 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SP6Q3SY56 376 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 Q6ZNX1 250 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
ABCA1-203ENST00000423487 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 TP53RKQ96S44 253 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
ABCA1-203ENST00000423487 ACANP16112 2415 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 A0A0U1RQK1 487 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 SNRPGP15A8MWD9 76 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 H0YJW9 148 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 TIMM23O14925 209 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 RBFOX2O43251 390 aaKnown RBP eCLIP12.87□□□□□ -0.35
ABCA1-203ENST00000423487 CREBL2O60519 120 aaPredicted RBP12.87□□□□□ -0.35
ABCA1-203ENST00000423487 FCGR3BO75015 233 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 DUS4LO95620 317 aaKnown RBP12.87□□□□□ -0.35
ABCA1-203ENST00000423487 SERPINE2P07093 398 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 FBP1P09467 338 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 UCP1P25874 307 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 SRP14P37108 136 aaKnown RBP12.87□□□□□ -0.35
ABCA1-203ENST00000423487 RAB13P51153 203 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 SRPXP78539 464 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM187Q14656 261 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 OR2B11Q5JQS5 317 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 DHRS7BQ6IAN0 325 aaPredicted RBP12.87□□□□□ -0.35
ABCA1-203ENST00000423487 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 C9orf139Q6ZV77 190 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 OR52B4Q8NGK2 314 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 MEGF9Q9H1U4 602 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 WASHC3Q9Y3C0 194 aa12.87□□□□□ -0.35
ABCA1-203ENST00000423487 SETXQ7Z333 2677 aaKnown RBP12.86□□□□□ -0.35
ABCA1-203ENST00000423487 PIGBOS1A0A0B4J2F0 54 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 C7orf66A4D0T2 115 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 H7C2Y5 167 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 RPA2P15927 270 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 CD1BP29016 333 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 BRS3P32247 399 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 HABP2Q14520 560 aaPredicted RBP12.86□□□□□ -0.35
ABCA1-203ENST00000423487 PDPNQ86YL7 162 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 COQ8AQ8NI60 647 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 PHB2Q99623 299 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 ZANQ9Y493 2812 aa12.86□□□□□ -0.35
ABCA1-203ENST00000423487 ZNF469Q96JG9 3925 aaPredicted RBP12.85□□□□□ -0.35
ABCA1-203ENST00000423487 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms