RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 DEDDO75618 318 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 SCGB1D2O95969 90 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 CEACAM6P40199 344 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 GNB2P62879 340 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TRAT1Q6PIZ9 186 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 GALMQ96C23 342 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 CXorf58Q96LI9 332 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 OR2S2Q9NQN1 319 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 UBE2J1Q9Y385 318 aaPredicted RBP7.33□□□□□ -1.24
HPS4-204ENST00000422379 LSM5Q9Y4Y9 91 aaKnown RBP7.33□□□□□ -1.24
HPS4-204ENST00000422379 WNK2Q9Y3S1 2297 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TRBV23-1A0A0A0MS06 115 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 PPIAL4CA0A0B4J2A2 164 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 ZNF729A6NN14 1252 aaPredicted RBP7.33□□□□□ -1.24
HPS4-204ENST00000422379 NDUFS8O00217 210 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 PROP1O75360 226 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 PGLYRP1O75594 196 aaPredicted RBP7.33□□□□□ -1.24
HPS4-204ENST00000422379 MBPP02686 304 aaPredicted RBP7.33□□□□□ -1.24
HPS4-204ENST00000422379 PPIAL4GP0DN37 164 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 RRASP10301 218 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 UCP1P25874 307 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 S100GP29377 79 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 LINC00205P59089 165 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 SRPXP78539 464 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 HTD2P86397 168 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 MORN2Q502X0 79 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 Q5PR19 223 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 FAM74A1Q5RGS3 127 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 CMTM1Q8IZ96 169 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 ZNF439Q8NDP4 499 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 BVESQ8NE79 360 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 OR52M1Q8NGK5 317 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TMEM56Q96MV1 263 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 ZNF714Q96N38 554 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TOLLIPQ9H0E2 274 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 GFOD1Q9NXC2 390 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TMED3Q9Y3Q3 217 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 TMEM56-RWDD3S4R434 201 aa7.33□□□□□ -1.24
HPS4-204ENST00000422379 CSPG4Q6UVK1 2322 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 LOC105371242A0A075B767 164 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 C17orf98A8MV24 154 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 A8MXK9 166 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 H0Y980 276 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 K7EPK0 472 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 SPINT2O43291 252 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 HSPA12AO43301 675 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 CDS2O95674 445 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 OR8U9P0C7N5 309 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 HKR1P10072 659 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 NFYBP25208 207 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
HPS4-204ENST00000422379 SMCO1Q147U7 214 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 CT45A1Q5HYN5 189 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 HEPN1Q6WQI6 88 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 SELENOHQ8IZQ5 122 aaKnown RBP7.32□□□□□ -1.24
HPS4-204ENST00000422379 LRRC75A-AS1Q8N1F1 130 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 FAM71E2Q8N5Q1 922 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 WFDC11Q8NEX6 87 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 OR4D5Q8NGN0 318 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 OR8U1Q8NH10 309 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 CT45A3Q8NHU0 189 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 STOML3Q8TAV4 291 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 PHYHIPLQ96FC7 376 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 IFI27L2Q9H2X8 130 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 RAB9BQ9NP90 201 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 CYTL1Q9NRR1 136 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 TAS2R3Q9NYW6 316 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 IDI2-AS1Q9NZ38 188 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 RNF150Q9ULK6 438 aa7.32□□□□□ -1.24
HPS4-204ENST00000422379 YLPM1P49750 1951 aaKnown RBP7.32□□□□□ -1.24
HPS4-204ENST00000422379 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 IGHV1-8P0DP01 117 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 F2RP25116 425 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 ARF6P62330 175 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 LDLRAD2Q5SZI1 272 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 HCP5Q6MZN7 132 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 ODF3L1Q8IXM7 274 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 CIARTQ8N365 385 aaPredicted RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 OR51H1Q8NH63 302 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 ABHD14BQ96IU4 210 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 GNG12Q9UBI6 72 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 JPT1Q9UK76 154 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 PSG11Q9UQ72 335 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.31□□□□□ -1.244e-7■■■■□ 19.8
HPS4-204ENST00000422379 TPT1P13693 172 aaKnown RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 RPL12P30050 165 aaKnown RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 GNG10P50151 68 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 EIF4EBP1Q13541 118 aaPredicted RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 AANATQ16613 207 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 NMSQ5H8A3 153 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 PDZD9Q8IXQ8 264 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 SUN5Q8TC36 379 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 TNFRSF14Q92956 283 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 NINJ1Q92982 152 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 RBPMSQ93062 196 aaKnown RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 SLC25A32Q9H2D1 315 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms