RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LHFPL5Q8TAF8 219 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 DNAJB3Q8WWF6 145 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 C12orf43Q96C57 262 aaKnown RBP1.29□□□□□ -2.2
LINC00397-201ENST00000422074 GNB1LQ9BYB4 327 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 NSRP1Q9H0G5 558 aaKnown RBP1.29□□□□□ -2.2
LINC00397-201ENST00000422074 WDR54Q9H977 334 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 NRBP2Q9NSY0 501 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 TP53TG1Q9Y2A0 90 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 THSD7AQ9UPZ6 1657 aa1.29□□□□□ -2.2
LINC00397-201ENST00000422074 IGLV3-9A0A075B6K5 115 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 C5orf49A4QMS7 147 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 M0R381 172 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 YEATS4O95619 227 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 IL6P05231 212 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 UCHL1P09936 223 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 CCL3P10147 92 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 HIST1H1CP16403 213 aaKnown RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 CXCL3P19876 107 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 PEBP1P30086 187 aaKnown RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 RPL27AP46776 148 aaKnown RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 XCL1P47992 114 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 CD151P48509 253 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 RAP1GDS1P52306 607 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 TAS2R30P59541 319 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 UBE2G2P60604 165 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 FABP5Q01469 135 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 ZNF90Q03938 601 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 PABPC1L2AQ5JQF8 200 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 DNM1P34Q6PK57 102 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 RIBC1Q8N443 379 aaPredicted RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 DAND5Q8N907 189 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 OR5J2Q8NH18 312 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 ASB13Q8WXK3 278 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 CPNE2Q96FN4 548 aaPredicted RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 SLC22A4Q9H015 551 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 DRC3Q9H069 523 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 PCYT1BQ9Y5K3 369 aaPredicted RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 RTEL1-TNFRSF6BF6WH68 1400 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 PXDNLA1KZ92 1463 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 DENND4BO75064 1496 aaPredicted RBP1.28□□□□□ -2.2
LINC00397-201ENST00000422074 ADGRB3O60242 1522 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 SLX4Q8IY92 1834 aa1.28□□□□□ -2.2
LINC00397-201ENST00000422074 GRIN2BQ13224 1484 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 TEX50A0A1B0GTY4 177 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 FABP12A6NFH5 140 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 HLA-DQB2P05538 268 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 GPX1P07203 203 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 BPGMP07738 259 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 UGT2B7P16662 529 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 CXCL2P19875 107 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 IFNGR2P38484 337 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 CD79BP40259 229 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 GABRA2P47869 451 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 CDC34P49427 236 aaPredicted RBP1.27□□□□□ -2.21
LINC00397-201ENST00000422074 RPL14P50914 215 aaKnown RBP1.27□□□□□ -2.21
LINC00397-201ENST00000422074 HLA-DRB3P79483 266 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 N4BP2L1Q5TBK1 243 aaPredicted RBP1.27□□□□□ -2.21
LINC00397-201ENST00000422074 PDPK2PQ6A1A2 396 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 DRAM2Q6UX65 266 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 SLC51BQ86UW2 128 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 NAA40Q86UY6 237 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 C1orf174Q8IYL3 243 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 OR13C8Q8NGS7 320 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 SMIM19Q96E16 107 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 ANKRD36BP1Q96IX9 119 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 SLC35G5Q96KT7 338 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 NMNAT3Q96T66 252 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 TMEM109Q9BVC6 243 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 TAAR3PQ9P1P4 343 aa1.27□□□□□ -2.21
LINC00397-201ENST00000422074 RAD50Q92878 1312 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 TRGV5A0A0B4J1U4 118 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 C1orf232A0A0U1RR37 186 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 TINCRA0A1B0GVN0 87 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 A0A1W2PQD3 144 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 RFPL4AA6NLU0 287 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 RFPL4AL1F8VTS6 287 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 BIRC5O15392 142 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 SSNA1O43805 119 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 NDUFB2O95178 105 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 MT-CO2P00403 227 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 NPYP01303 97 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 TPM3P06753 285 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 TMEM258P61165 79 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 AP1S1P61966 158 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 TBPL1P62380 186 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 LRRC26Q2I0M4 334 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 FAM19A5Q7Z5A7 132 aaPredicted RBP1.26□□□□□ -2.21
LINC00397-201ENST00000422074 C10orf126Q8N4M7 172 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 PACRGQ96M98 296 aaPredicted RBP1.26□□□□□ -2.21
LINC00397-201ENST00000422074 KCTD7Q96MP8 289 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 ZNF471Q9BX82 626 aaPredicted RBP1.26□□□□□ -2.21
LINC00397-201ENST00000422074 HDHD2Q9H0R4 259 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 MS4A6AQ9H2W1 248 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 BABAM2Q9NXR7 383 aa1.26□□□□□ -2.21
LINC00397-201ENST00000422074 PIK3R4Q99570 1358 aa1.25□□□□□ -2.21
LINC00397-201ENST00000422074 TRAV41A0A0B4J266 112 aa1.25□□□□□ -2.21
LINC00397-201ENST00000422074 A0A1B0GVG6 124 aa1.25□□□□□ -2.21
LINC00397-201ENST00000422074 MDFIC2A0A1B0GVS7 189 aa1.25□□□□□ -2.21
LINC00397-201ENST00000422074 GOLGA8KD6RF30 607 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms