RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 hCG_38984A0A1B0GV85 526 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 CTDSP1Q9GZU7 261 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 HIGD1AQ9Y241 93 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MMP24Q9Y5R2 645 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 A0A0G2JLM5 398 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 H7BYZ3 331 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 M6PRP20645 277 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MFAP4P55083 255 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MRPL37Q9BZE1 423 aaKnown RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 P2RY1P47900 373 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 NPBWR2P48146 333 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 GGNQ86UU5 652 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MARVELD3Q96A59 401 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 DYSFO75923 2080 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 CD37P11049 281 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 KCNK7Q9Y2U2 307 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 KPTNQ9Y664 436 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 CDS2O95674 445 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MBPP02686 304 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 EFNA4P52798 201 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 HSD17B13Q7Z5P4 300 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MANBALQ9NQG1 85 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 TRAV30A0A087WSZ9 112 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 RAB32Q13637 225 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 POC1AQ8NBT0 407 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF439Q8NDP4 499 aa9.14□□□□□ -0.95
PTCH1-206ENST00000421141 MED13LQ71F56 2210 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MPC2O95563 127 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF154Q13106 437 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MIDNQ504T8 468 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 FAM166AQ6J272 317 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 RXFP4Q8TDU9 374 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 IGHV3-21A0A0B4J1V1 117 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 RPL30P62888 115 aaKnown RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MEF2CQ06413 473 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 IGFL3Q6UXB1 125 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 CLEC18BQ6UXF7 455 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 WDR87Q6ZQQ6 2873 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 KIAA1324LA8MWY0 1029 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 HLA-GP17693 338 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 RCC1P18754 421 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 SP5Q6BEB4 398 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 OR10J6PQ8NGY7 276 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 URGCP-MRPS24S4R325 110 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MBD3L4A6NDZ8 208 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MBD3L3A6NE82 208 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MBD3L5A6NJ08 208 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 GLIPR1P48060 266 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 MBD3L2Q8NHZ7 208 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-206ENST00000421141 Q96M66 194 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 NPAS1Q99742 590 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 CRIM1Q9NZV1 1036 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 LINC00312Q9Y6C7 94 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 SPCS3P61009 180 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 GAMTQ14353 236 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 CLEC12BQ2HXU8 276 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 LINC01590Q5TEZ4 76 aa9.13□□□□□ -0.95
PTCH1-206ENST00000421141 SSTR5P35346 364 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 NPIPB11E5RHQ5 1161 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 CFDP00746 253 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 VSIG10L2P0DP72 767 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 MBNL2Q5VZF2 373 aaKnown RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 GAB2Q9UQC2 676 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 ORM1P02763 201 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 HIST1H1BP16401 226 aaKnown RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 EFNB2P52799 333 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 OXA1LQ15070 435 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF737O75373 536 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 FXYD3Q14802 87 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 RHOVQ96L33 236 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 TLNRD1Q9H1K6 362 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 PROB1E7EW31 1015 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 PPP1R2P9O14990 202 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 SLC31A2O15432 143 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 NECAP1Q8NC96 275 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 ADAD2Q8NCV1 583 aaKnown RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 LMX1BO60663 402 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 MMP7P09237 267 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-206ENST00000421141 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 MS4A10Q96PG2 267 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 CLCF1Q9UBD9 225 aa9.12□□□□□ -0.95
PTCH1-206ENST00000421141 FAM24AA6NFZ4 105 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms