RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SPAG16Q8N0X2 631 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 LINC00311Q8N616 119 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 OR13D1Q8NGV5 346 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 CLDND2Q8NHS1 167 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 LHFPL5Q8TAF8 219 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF596Q8TC21 504 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C10orf105Q8TEF2 133 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 GLYATL2Q8WU03 294 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 PPP1R1CQ8WVI7 109 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 DCUN1D4Q92564 292 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 LEAP2Q969E1 77 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C2orf50Q96LR7 162 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM56Q96MV1 263 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 GPHA2Q96T91 129 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 MBD2Q9UBB5 411 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 RNF150Q9ULK6 438 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM56-RWDD3S4R434 201 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 ARHGAP32A7KAX9 2087 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 IGHV2-26A0A0B4J1V2 119 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 IGHV2-70DA0A0C4DH43 119 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 A0A1W2PPE3 182 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 C17orf98A8MV24 154 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 KIAA1324LA8MWY0 1029 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 J3QR06 171 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 L7N2F9 121 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 ARPC5O15511 151 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 FCGR3BO75015 233 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 S1PR2O95136 353 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 MPC2O95563 127 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 IGLV2-14P01704 120 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 IGHV3-7P01780 117 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 RRASP10301 218 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 SLC25A6P12236 298 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 PVALBP20472 110 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 DUTP33316 252 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 ARHGDIBP52566 201 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF137PP52743 207 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 PRRX1P54821 245 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 TAGLNQ01995 201 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 EIF4EBP1Q13541 118 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF345Q14585 488 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 HLA-DRB5Q30154 266 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 NMSQ5H8A3 153 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF833PQ6ZTB9 187 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 LYZL2Q7Z4W2 148 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 TGIF2LXQ8IUE1 241 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 SELENOHQ8IZQ5 122 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 C9orf62Q8N4C0 152 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 INO80EQ8NBZ0 244 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 LY6G5BQ8NDX9 201 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 BEND2Q8NDZ0 799 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 OR1S1Q8NH92 325 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 GRPEL2Q8TAA5 225 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 LSM10Q969L4 123 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM186Q96B77 213 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 AGMATQ9BSE5 352 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 SLC35D1Q9NTN3 355 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 GSKIPQ9P0R6 139 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 GAB2Q9UQC2 676 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 LSM5Q9Y4Y9 91 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 HSPB11Q9Y547 144 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 KPTNQ9Y664 436 aa4.88□□□□□ -1.63
HMGB3-202ENST00000419110 HELZ2Q9BYK8 2649 aaKnown RBP4.88□□□□□ -1.63
HMGB3-202ENST00000419110 TENM4Q6N022 2769 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 SPG11Q96JI7 2443 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 DCHS2Q6V1P9 2916 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 TRAV14DV4A0A0A6YYC5 116 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 A0A1B0GU03 582 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 KANTRA0A1W2PQU2 76 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 MARCH11A6NNE9 402 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 LINC00473A8K010 186 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 HMSDA8MTL9 139 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 G3V3Q6 166 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 H7C2Y5 167 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 RBMXL2O75526 392 aaKnown RBP4.87□□□□□ -1.63
HMGB3-202ENST00000419110 MMP23AO75900 390 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 CRYZL1O95825 349 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 HPRT1P00492 218 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 HRASP01112 189 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 RLN2P04090 185 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 SLC25A4P12235 298 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 NQO2P16083 231 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 PSMB6P28072 239 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 CEACAM3P40198 252 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 LPAR6P43657 344 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 NKX2-1P43699 371 aaPredicted RBP4.87□□□□□ -1.63
HMGB3-202ENST00000419110 RPL30P62888 115 aaKnown RBP4.87□□□□□ -1.63
HMGB3-202ENST00000419110 VAMP2P63027 116 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 LCN2P80188 198 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 RAB32Q13637 225 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 CLEC12BQ2HXU8 276 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 CT45A1Q5HYN5 189 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 FAM53AQ6NSI3 398 aaPredicted RBP4.87□□□□□ -1.63
HMGB3-202ENST00000419110 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
HMGB3-202ENST00000419110 PRSS54Q6PEW0 395 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms