RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 RNF5Q99942 180 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 RBM38Q9H0Z9 239 aaKnown RBP8.31□□□□□ -1.08
RFC1-203ENST00000418436 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 SCPEP1Q9HB40 452 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 NECAP2Q9NVZ3 263 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 ADAM30Q9UKF2 790 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 MRPS7Q9Y2R9 242 aaKnown RBP8.31□□□□□ -1.08
RFC1-203ENST00000418436 WASHC3Q9Y3C0 194 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 IGKV1D-13A0A0B4J2D9 117 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 MEIS3P1A6NDR6 274 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 FAM25AB3EWG3 89 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 FAM25CB3EWG5 89 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 FAM25GB3EWG6 89 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 SULT1C2O00338 296 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 CTDSP2O14595 271 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 NBR2O15453 112 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 NOL3O60936 208 aaKnown RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 PEX14O75381 377 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 RBBP9O75884 186 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 SLC22A5O76082 557 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 OR5H8P0DN80 308 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 IGKV1-13P0DP09 117 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 CNTFRP26992 372 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 DUTP33316 252 aaKnown RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 LUMP51884 338 aaPredicted RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 TAGLNQ01995 201 aaKnown RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 MMDQ15546 238 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 OVCH2Q7RTZ1 564 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 SLC35E3Q7Z769 313 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 PDPNQ86YL7 162 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 LYSMD2Q8IV50 215 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 ZNF645Q8N7E2 425 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 DDB2Q92466 427 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 RASL11BQ9BPW5 248 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 SLIRPQ9GZT3 109 aaKnown RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 IFT46Q9NQC8 304 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 EXTL2Q9UBQ6 330 aa8.3□□□□□ -1.08
RFC1-203ENST00000418436 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
RFC1-203ENST00000418436 TRRAPQ9Y4A5 3859 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 H7C2Y5 167 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 KCNAB3O43448 404 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 FBXO24O75426 580 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 HLA-DRB1P01911 266 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 APOA2P02652 100 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 FCER2P06734 321 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 CD28P10747 220 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 AADACP22760 399 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 FCGR2CP31995 323 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 THBS3P49746 956 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 CD83Q01151 205 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 ID3Q02535 119 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 EIF4EBP1Q13541 118 aaPredicted RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 DYRK1AQ13627 763 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 CDK10Q15131 360 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 MSMO1Q15800 293 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 ZNF660Q6AZW8 331 aaPredicted RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 DHRS11Q6UWP2 260 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 SNX29P2Q8IUI4 249 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 LAX1Q8IWV1 398 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 OR5AU1Q8NGC0 362 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 ADTRPQ96IZ2 230 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 ABHD1Q96SE0 405 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 HSPB9Q9BQS6 159 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 NXF2Q9GZY0 626 aaKnown RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 SLC35D1Q9NTN3 355 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 ZNF107Q9UII5 783 aaPredicted RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
RFC1-203ENST00000418436 RBMX2Q9Y388 322 aaKnown RBP8.29□□□□□ -1.08
RFC1-203ENST00000418436 LINC00473A8K010 186 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 J3QRK9 145 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 M0QZ24 198 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 ZNF701M0R085 212 aaPredicted RBP8.28□□□□□ -1.08
RFC1-203ENST00000418436 AP4M1O00189 453 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 RRHO14718 337 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 SPDEFO95238 335 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 PPYP01298 95 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 IGF1P05019 195 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 RRASP10301 218 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 TAS2R46P59540 309 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 PSG5Q15238 335 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 TMEM177Q53S58 311 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 TCTEX1D4Q5JR98 221 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 C10orf99Q6UWK7 81 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 FOXRED2Q8IWF2 684 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 STPG2Q8N412 459 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 C11orf44Q8N8P7 122 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 CHPT1Q8WUD6 406 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 C15orf40Q8WUR7 153 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 FLYWCH2Q96CP2 140 aaKnown RBP8.28□□□□□ -1.08
RFC1-203ENST00000418436 NOL4LQ96MY1 436 aaPredicted RBP8.28□□□□□ -1.08
RFC1-203ENST00000418436 FANCD2OSQ96PS1 177 aa8.28□□□□□ -1.08
RFC1-203ENST00000418436 KIAA1456Q9P272 454 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms