RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ATG101Q9BSB4 218 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 EEF1AKMT3Q96AZ1 226 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CALYQ9NYX4 217 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CCL27Q9Y4X3 112 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 MOSPD3O75425 235 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 ZP4Q12836 540 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 MMD2Q8IY49 270 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 ACACAQ13085 2346 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 LCTP09848 1927 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 KMT2EQ8IZD2 1858 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 PITX3O75364 302 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CRHP06850 196 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 FCGR3AP08637 254 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 SCTP09683 121 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 HSPB7Q9UBY9 170 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 B4DEV8 164 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
PTCH1-205ENST00000418258 LOC101059948A0A1B0GTJ6 334 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 OR2A4O95047 310 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 VSIG8P0DPA2 414 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 SNAI3Q3KNW1 292 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 COX19Q49B96 90 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 OR2A7Q96R45 310 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CX3CL1P78423 397 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 LCN2P80188 198 aa9.68□□□□□ -0.86
PTCH1-205ENST00000418258 MRPL30Q8TCC3 161 aaKnown RBP9.68□□□□□ -0.86
PTCH1-205ENST00000418258 KLF14Q8TD94 323 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-205ENST00000418258 CDS2O95674 445 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 TSPOP30536 169 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 DLX6P56179 175 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 BPIFA4PQ86YQ2 179 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ELOVL1Q9BW60 279 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ABCA4P78363 2273 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 LNP1A1A4G5 178 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 TSPAN2O60636 221 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ZNF56Q15929 161 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 OR4C13Q8NGP0 309 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 FAM168AQ92567 244 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 PRSS27Q9BQR3 290 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 TLNRD1Q9H1K6 362 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ST6GALNAC2Q9UJ37 374 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 A0A1W2PPC1 479 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 A0A1W2PRX2 142 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 B9A039 149 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 PCOLCEQ15113 449 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 CLEC7AQ9BXN2 247 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 AWAT1Q58HT5 328 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 SCMH1Q96GD3 660 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ELOVL5Q9NYP7 299 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ZNF107Q9UII5 783 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 TRAV20A0A0B4J274 112 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 MMP16P51512 607 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ISOC2Q96AB3 205 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 RALYQ9UKM9 306 aaKnown RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ZFP30Q9Y2G7 519 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 A6NDN8 102 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 EPOPA6NHQ4 379 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 COX6A1P12074 109 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 APOBEC3AP31941 199 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 MFAP2P55001 183 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 PSG9Q00887 426 aa9.67□□□□□ -0.86
PTCH1-205ENST00000418258 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
PTCH1-205ENST00000418258 ODAMA1E959 279 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 A8MWL6 223 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 TMEM74BQ9NUR3 256 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 FOXJ2Q9P0K8 574 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 NPFFO15130 113 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 CD99P14209 185 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 PNKDQ8N490 385 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 GALNT14Q96FL9 552 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 QTRT1Q9BXR0 403 aaKnown RBP9.66□□□□□ -0.86
PTCH1-205ENST00000418258 CENPVL1A0A0U1RR11 272 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 MMP9P14780 707 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 ZNF343Q6P1L6 599 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 CHRNA10Q9GZZ6 450 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 ACAA1P09110 424 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-205ENST00000418258 HOGA1Q86XE5 327 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 WDFY1Q8IWB7 410 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 SSBP3Q9BWW4 388 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-205ENST00000418258 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 DNASE2BQ8WZ79 361 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 RBKSQ9H477 322 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 HS3ST3B1Q9Y662 390 aa9.66□□□□□ -0.86
PTCH1-205ENST00000418258 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 NPPCP23582 126 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 OR10J1P30954 320 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 DPPA3Q6W0C5 159 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 ZPLD1Q8TCW7 415 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 KLK13Q9UKR3 277 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms