RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TSNAXQ99598 290 aaKnown RBP12.2□□□□□ -0.46
ITGB1-204ENST00000417122 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
ITGB1-204ENST00000417122 ST6GALNAC5Q9BVH7 336 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 KLK15Q9H2R5 256 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 FBXO7Q9Y3I1 522 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 TMEM235A6NFC5 223 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 SPDEFO95238 335 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
ITGB1-204ENST00000417122 SCAND1P57086 179 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 RAB25P57735 213 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 GNG2P59768 71 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 PITPNAQ00169 270 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 ZNF260Q3ZCT1 412 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 IDNKQ5T6J7 187 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
ITGB1-204ENST00000417122 MINDY2Q8NBR6 621 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 DCSTAMPQ9H295 470 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 NOTCH3Q9UM47 2321 aa12.19□□□□□ -0.46
ITGB1-204ENST00000417122 A0A1W2PN81 502 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-204ENST00000417122 CHRNA7P36544 502 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 RAB9AP51151 201 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 KRTAP10-11P60412 298 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 KIAA0141Q14154 515 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-204ENST00000417122 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 ZNF491Q8N8L2 437 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 TSPAN14Q8NG11 270 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 OR5H6Q8NGV6 325 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 NUDCD2Q8WVJ2 157 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 DPF1Q92782 380 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 C5orf30Q96GV9 206 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 A3GALT2U3KPV4 340 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 DNAH3Q8TD57 4116 aa12.18□□□□□ -0.46
ITGB1-204ENST00000417122 A0A087WXM4 84 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 SLC25A17O43808 307 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 TNFAIP8O95379 198 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 CA2P00918 260 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 CTXN2P0C2S0 81 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
ITGB1-204ENST00000417122 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
ITGB1-204ENST00000417122 EGFEM1PQ0D2K5 195 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
ITGB1-204ENST00000417122 CBX3Q13185 183 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 TIMM50Q3ZCQ8 353 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 SLC25A38Q96DW6 304 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
ITGB1-204ENST00000417122 GNB4Q9HAV0 340 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 VCX3AQ9NNX9 186 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
ITGB1-204ENST00000417122 VSIG4Q9Y279 399 aa12.17□□□□□ -0.46
ITGB1-204ENST00000417122 SSX5O60225 188 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 SOX15O60248 233 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 LGALS7P47929 136 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 AKIRIN2Q53H80 203 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 CNIH2Q6PI25 160 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 BVESQ8NE79 360 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
ITGB1-204ENST00000417122 TRAV18A0A075B6X5 111 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 A0A0A6YYH2 397 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 A6NJ64 397 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 I3L521 148 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 J3QRK9 145 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 AIREO43918 545 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 TMEM127O75204 238 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 RRASP10301 218 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-204ENST00000417122 DUTP33316 252 aaKnown RBP12.15□□□□□ -0.46
ITGB1-204ENST00000417122 TGFBR1P36897 503 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 LUMP51884 338 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-204ENST00000417122 RUNX1Q01196 453 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 FHL3Q13643 280 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 FXYD3Q14802 87 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 ACTBL2Q562R1 376 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 CASTOR1Q8WTX7 329 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 ARPC1AQ92747 370 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 YIPF6Q96EC8 236 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 DIABLOQ9NR28 239 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 ANXA10Q9UJ72 324 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
ITGB1-204ENST00000417122 K7EIL1 84 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms