RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 YTHDF1Q9BYJ9 559 aaKnown RBP3.9□□□□□ -1.79
VPS41-205ENST00000414632 PRSS22Q9GZN4 317 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 DPAGT1Q9H3H5 408 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 ABCB10Q9NRK6 738 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 AK3Q9UIJ7 227 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 DAPK2Q9UIK4 370 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 STUB1Q9UNE7 303 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 SSR3Q9UNL2 185 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 PSG11Q9UQ72 335 aa3.9□□□□□ -1.79
VPS41-205ENST00000414632 TBL2Q9Y4P3 447 aaKnown RBP3.9□□□□□ -1.79
VPS41-205ENST00000414632 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.79
VPS41-205ENST00000414632 TRRAPQ9Y4A5 3859 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 A0A087WXM4 84 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 IGHV3-72A0A0B4J1Y9 119 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TRAV1-2A0A0B4J238 106 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 FAM90A10PA6NDY2 464 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 IFITM5A6NNB3 132 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 FOXI3A8MTJ6 420 aaPredicted RBP3.89□□□□□ -1.79
VPS41-205ENST00000414632 LEUTXA8MZ59 168 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 BUB1B-PAK6H3BSN5 160 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 PDCD5O14737 125 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TNFAIP8O95379 198 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 IGLV1-47P01700 117 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 CD37P11049 281 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 GNB3P16520 340 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 SDC2P34741 201 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 PPP1CCP36873 323 aaKnown RBP3.89□□□□□ -1.79
VPS41-205ENST00000414632 PRRX1P54821 245 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TMEM50BP56557 158 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 UBE2V1Q13404 147 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 FHL2Q14192 279 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 HNF4GQ14541 408 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 ZNF674Q2M3X9 581 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 C6orf183Q5T699 404 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 IDNKQ5T6J7 187 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TPTE2P1Q5T6R2 138 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MINOS1Q5TGZ0 78 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 CD200R1LQ6Q8B3 271 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR2W3Q7Z3T1 314 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 DRAM1Q8N682 238 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR10X1Q8NGY0 326 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR4F5Q8NH21 305 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR56B4Q8NH76 319 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR5R1Q8NH85 324 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 LINC01006Q8NI28 216 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 ZNF596Q8TC21 504 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 LGALS14Q8TCE9 139 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 CAPSLQ8WWF8 208 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 IL1F10Q8WWZ1 152 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MAFIPQ8WZ33 124 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MALSU1Q96EH3 234 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MS4A10Q96PG2 267 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 URM1Q9BTM9 101 aaKnown RBP3.89□□□□□ -1.79
VPS41-205ENST00000414632 TM2D1Q9BX74 207 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 PECRQ9BY49 303 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MMP28Q9H239 520 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 TAF9BQ9HBM6 251 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 SPACA1Q9HBV2 294 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 PLEKHJ1Q9NW61 149 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 DPM3Q9P2X0 92 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 GNG12Q9UBI6 72 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 GHRLQ9UBU3 117 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 ELF5Q9UKW6 265 aaPredicted RBP3.89□□□□□ -1.79
VPS41-205ENST00000414632 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 MINOS1-NBL1R4GNA1 71 aa3.89□□□□□ -1.79
VPS41-205ENST00000414632 A0A1W2PPI3 338 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 CLPSL1A2RUU4 121 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 A4D1N5 150 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 A6NDX4 124 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 ZNF736B4DX44 427 aaPredicted RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 LY6LH3BQJ8 138 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 HSD17B6O14756 317 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 ORC5O43913 435 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 AIREO43918 545 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 NDUFA7O95182 113 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 SNRNP70P08621 437 aaKnown RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 GZMHP20718 246 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 CD34P28906 385 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 FGF9P31371 208 aaPredicted RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 CEACAM3P40198 252 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 PSMD7P51665 324 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 KRTAP10-2P60368 255 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 SNRPEP62304 92 aaKnown RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 BLCAPP62952 87 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 HLA-DRB3P79483 266 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 PAX5Q02548 391 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 HES1Q14469 280 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 C10orf25Q5T742 122 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 SFXN4Q6P4A7 337 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 Q6ZTK2 550 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 MOB3BQ86TA1 216 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 LYG1Q8N1E2 194 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 GAPTQ8N292 157 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 ZNF439Q8NDP4 499 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 OR56B1Q8NGI3 324 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 OR4C13Q8NGP0 309 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms