RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 LAMTOR1Q6IAA8 161 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 C11orf42Q8N5U0 333 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 SIRT7Q9NRC8 400 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 RAXQ9Y2V3 346 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 PXMP4Q9Y6I8 212 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 A0A0G2JMM0 328 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 TEX50A0A1B0GTY4 177 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 A0A1W2PPB8 328 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 A0A1W2PRS3 328 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 KIR3DP1A8MWS1 328 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 DEDDO75618 318 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 ZNF735P0CB33 412 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 CLDN18P56856 261 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 SS18L1O75177 396 aaPredicted RBP14.76□□□□□ -0.05
PHRF1-202ENST00000413872 LHX2P50458 406 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 RAB9AP51151 201 aa14.76□□□□□ -0.05
PHRF1-202ENST00000413872 QTRT1Q9BXR0 403 aaKnown RBP14.76□□□□□ -0.05
PHRF1-202ENST00000413872 VSIG10L2P0DP72 767 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 PTTG1IPP53801 180 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 NPDC1Q9NQX5 325 aaPredicted RBP14.75□□□□□ -0.05
PHRF1-202ENST00000413872 CACNA1IQ9P0X4 2223 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 RNFT1Q5M7Z0 435 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 WFDC3Q8IUB2 231 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 SPACA3Q8IXA5 215 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 MRPL30Q8TCC3 161 aaKnown RBP14.75□□□□□ -0.05
PHRF1-202ENST00000413872 MTCL1Q9Y4B5 1905 aaKnown RBP14.75□□□□□ -0.05
PHRF1-202ENST00000413872 TMEM218A2RU14 115 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 MFNGO00587 321 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 BSPH1Q075Z2 132 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 SMAGPQ0VAQ4 97 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 ACP7Q6ZNF0 438 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 LRRC75AQ8NAA5 344 aa14.75□□□□□ -0.05
PHRF1-202ENST00000413872 KBTBD11O94819 623 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 TBX6O95947 436 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-202ENST00000413872 LINC00869P0C866 280 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 IGHV1-2P23083 117 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 NPBWR2P48146 333 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 BPIFA4PQ86YQ2 179 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 PNKDQ8N490 385 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 POC1AQ8NBT0 407 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 ANKRD36A6QL64 1941 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 IGHV3-21A0A0B4J1V1 117 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 MARCH11A6NNE9 402 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 C9orf106Q8NAJ2 232 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 RBKSQ9H477 322 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 PPOXP50336 477 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 PQLC2Q6ZP29 291 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 TUBD1Q9UJT1 453 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 EP300Q09472 2414 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-202ENST00000413872 E9PLN8 166 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 KLF7O75840 302 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-202ENST00000413872 FABP4P15090 132 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 P2RY4P51582 365 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 TMEM78Q5T7P6 136 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 OR10J6PQ8NGY7 276 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 RBM14Q96PK6 669 aaKnown RBP14.74□□□□□ -0.05
PHRF1-202ENST00000413872 VKORC1Q9BQB6 163 aa14.74□□□□□ -0.05
PHRF1-202ENST00000413872 MEF2CQ06413 473 aaPredicted RBP14.73□□□□□ -0.05
PHRF1-202ENST00000413872 FAM24BQ8N5W8 94 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 RD3LP0DJH9 198 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 WNT5AP41221 380 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 NHLH1Q02575 133 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 NHLH2Q02577 135 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 OVCH2Q7RTZ1 564 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 GPR146Q96CH1 333 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 REPIN1Q9BWE0 567 aaKnown RBP14.73□□□□□ -0.05
PHRF1-202ENST00000413872 OR5AL1P0C617 328 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 IQCJQ1A5X6 159 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 HCP5Q6MZN7 132 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 RTN4RL2Q86UN3 420 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 EIF4E3Q8N5X7 224 aaKnown RBP14.73□□□□□ -0.05
PHRF1-202ENST00000413872 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.73□□□□□ -0.05
PHRF1-202ENST00000413872 SELENOHQ8IZQ5 122 aaKnown RBP14.73□□□□□ -0.05
PHRF1-202ENST00000413872 GBGT1Q8N5D6 347 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 SLC2A8Q9NY64 477 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 DOCK6Q96HP0 2047 aa14.73□□□□□ -0.05
PHRF1-202ENST00000413872 NPIPB11E5RHQ5 1161 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 IQCF6A8MYZ5 107 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 CD74P04233 296 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 UNC119Q13432 240 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 HIST1H1BP16401 226 aaKnown RBP14.72□□□□□ -0.05
PHRF1-202ENST00000413872 G0S2P27469 103 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 CHAC2Q8WUX2 184 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 VAMP8Q9BV40 100 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 ISLRO14498 428 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 ATP5G2Q06055 141 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 C16orf92Q96LL3 132 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 SSBP3Q9BWW4 388 aaPredicted RBP14.72□□□□□ -0.05
PHRF1-202ENST00000413872 TM2D1Q9BX74 207 aa14.72□□□□□ -0.05
PHRF1-202ENST00000413872 PDCD11Q14690 1871 aaKnown RBP14.72□□□□□ -0.05
PHRF1-202ENST00000413872 RND2P52198 227 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 ZNF146Q15072 292 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 FAM168AQ92567 244 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 DPM3Q9P2X0 92 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 TNFRSF9Q07011 255 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 C19orf24Q9BVV8 132 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 TLNRD1Q9H1K6 362 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 C17orf100A8MU93 164 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 AWAT1Q58HT5 328 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 OR10C1Q96KK4 312 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms