RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 REC114Q7Z4M0 266 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 H1FOOQ8IZA3 346 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-207ENST00000413642 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-207ENST00000413642 MRAPQ8TCY5 172 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 CASTOR1Q8WTX7 329 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 SLC25A38Q96DW6 304 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 RNF5Q99942 180 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 TPSG1Q9NRR2 321 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 SLC35D1Q9NTN3 355 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 IGLV1-40P01703 118 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 DTYMKP23919 212 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 ARL6IP1Q15041 203 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 C19orf54Q5BKX5 351 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 ZNF660Q6AZW8 331 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-207ENST00000413642 MINDY2Q8NBR6 621 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 MYOZ3Q8TDC0 251 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 FAM103A1Q9BTL3 118 aaKnown RBP20.51■□□□□ 0.87
VEGFA-207ENST00000413642 GNB4Q9HAV0 340 aa20.51■□□□□ 0.87
VEGFA-207ENST00000413642 RBM7Q9Y580 266 aaKnown RBP20.51■□□□□ 0.87
VEGFA-207ENST00000413642 SOX15O60248 233 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 DIRAS3O95661 229 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 APOA2P02652 100 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 PDPNQ86YL7 162 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 TSPAN14Q8NG11 270 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 ABHD5Q8WTS1 349 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 FLYWCH2Q96CP2 140 aaKnown RBP20.5■□□□□ 0.87
VEGFA-207ENST00000413642 OR5B12Q96R08 314 aa20.5■□□□□ 0.87
VEGFA-207ENST00000413642 DUS4LO95620 317 aaKnown RBP20.49■□□□□ 0.87
VEGFA-207ENST00000413642 CA2P00918 260 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 TMEM65Q6PI78 240 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 ZNF491Q8N8L2 437 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 C4orf3Q8WVX3 66 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 YIPF6Q96EC8 236 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 TSNAXQ99598 290 aaKnown RBP20.49■□□□□ 0.87
VEGFA-207ENST00000413642 NUBP2Q9Y5Y2 271 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 TGP01266 2768 aa20.49■□□□□ 0.87
VEGFA-207ENST00000413642 TRAV18A0A075B6X5 111 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 A0A1W2PN81 502 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 SLC25A17O43808 307 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 IGLV2-23P01705 113 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 CHRNA7P36544 502 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 RAB9AP51151 201 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 GNG2P59768 71 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 BVESQ8NE79 360 aa20.48■□□□□ 0.87
VEGFA-207ENST00000413642 NFYAP23511 347 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-207ENST00000413642 CRIP2P52943 208 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-207ENST00000413642 LSM3P62310 102 aaKnown RBP20.47■□□□□ 0.87
VEGFA-207ENST00000413642 PPP1R27Q86WC6 154 aa20.47■□□□□ 0.87
VEGFA-207ENST00000413642 DCSTAMPQ9H295 470 aa20.47■□□□□ 0.87
VEGFA-207ENST00000413642 A0A087WXM4 84 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 K7EIL1 84 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 ARPC1BO15143 372 aaKnown RBP20.46■□□□□ 0.87
VEGFA-207ENST00000413642 SCGNO76038 276 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 PJVKQ0ZLH3 352 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 UBE2E2Q96LR5 201 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 ETV7Q9Y603 341 aa20.46■□□□□ 0.87
VEGFA-207ENST00000413642 WI2-2373I1.2A0A1W2PRP0 233 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 AIREO43918 545 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 SPDEFO95238 335 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 PTHLHP12272 177 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 GNB1P62873 340 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 PITPNAQ00169 270 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 EGFEM1PQ0D2K5 195 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 UNQ5815/PRO19632Q6UWF5 114 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 ZNF562Q6V9R5 426 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 LFNGQ8NES3 379 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 OR11H1Q8NG94 326 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 ALX4Q9H161 411 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-207ENST00000413642 FOXA2Q9Y261 457 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-207ENST00000413642 VSIG4Q9Y279 399 aa20.45■□□□□ 0.86
VEGFA-207ENST00000413642 SRRM4A7MD48 611 aaKnown RBP20.44■□□□□ 0.86
VEGFA-207ENST00000413642 LINC00473A8K010 186 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 I3L521 148 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 TNFAIP8O95379 198 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 CRYGBP07316 175 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 DUTP33316 252 aaKnown RBP20.44■□□□□ 0.86
VEGFA-207ENST00000413642 RPS19P39019 145 aaKnown RBP20.44■□□□□ 0.86
VEGFA-207ENST00000413642 SCAND1P57086 179 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 SSBP2P81877 361 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-207ENST00000413642 ASPHD1Q5U4P2 390 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 DDB2Q92466 427 aa20.44■□□□□ 0.86
VEGFA-207ENST00000413642 MCRIP2Q9BUT9 160 aaKnown RBP20.44■□□□□ 0.86
VEGFA-207ENST00000413642 IGKV1D-13A0A0B4J2D9 117 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 FCER2P06734 321 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 IGKV1-13P0DP09 117 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 LUMP51884 338 aaPredicted RBP20.43■□□□□ 0.86
VEGFA-207ENST00000413642 FHL3Q13643 280 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 FXYD3Q14802 87 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 TMEM177Q53S58 311 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 CNIH2Q6PI25 160 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 GVQW1Q8N7I0 195 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 OR1N2Q8NGR9 330 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 GRPEL2Q8TAA5 225 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 HARBI1Q96MB7 349 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 MS4A10Q96PG2 267 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 ANXA10Q9UJ72 324 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 OR2W1Q9Y3N9 320 aa20.43■□□□□ 0.86
VEGFA-207ENST00000413642 CTXN2P0C2S0 81 aa20.42■□□□□ 0.86
VEGFA-207ENST00000413642 TIMM50Q3ZCQ8 353 aa20.42■□□□□ 0.86
VEGFA-207ENST00000413642 ARPC1AQ92747 370 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms