RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 IGKV1-5P01602 117 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 MMP9P14780 707 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 RPA2P15927 270 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 HOXB4P17483 251 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 VDAC1P21796 283 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 USF1P22415 310 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 PRTN3P24158 256 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 IL3RAP26951 378 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 KIR2DS2P43631 304 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 THBS3P49746 956 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 GZMKP49863 264 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 NKX2-5P52952 324 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 LINC00205P59089 165 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 CYCSP99999 105 aaKnown RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 ZNF816Q0VGE8 651 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 KLRD1Q13241 179 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 IAH1Q2TAA2 248 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 Q5BKY6 102 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 NMSQ5H8A3 153 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 Q5PR19 223 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 NCR3LG1Q68D85 454 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 HCP5Q6MZN7 132 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 C1orf122Q6ZSJ8 110 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 VMO1Q7Z5L0 202 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 NOXA1Q86UR1 476 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 KRTAP1-3Q8IUG1 177 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 SPAG16Q8N0X2 631 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 PNKDQ8N490 385 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 OR11H6Q8NGC7 330 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 OR4P4Q8NGL7 312 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 OR13D1Q8NGV5 346 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 CD300LFQ8TDQ1 290 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 PPP1R1CQ8WVI7 109 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 ST6GALNAC6Q969X2 333 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 TMEM186Q96B77 213 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 SEC22AQ96IW7 307 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 ADTRPQ96IZ2 230 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 C2orf50Q96LR7 162 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 MRPL20Q9BYC9 149 aaKnown RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 LPAR2Q9HBW0 351 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 MMP26Q9NRE1 261 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 PRELID3BQ9Y3B1 194 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 AMMECR1Q9Y4X0 333 aaPredicted RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 POLQO75417 2590 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 ABCA12Q86UK0 2595 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 CELSR2Q9HCU4 2923 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 VPS13CQ709C8 3753 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 ODF3BA8MYP8 253 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 BUB1B-PAK6H3BSN5 160 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 FCGR3BO75015 233 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 P0C879 139 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 CT45A6P0DMU7 189 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 CT45A5P0DMU8 189 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 CT45A7P0DMV0 189 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 LPAR6P43657 344 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 REG1BP48304 166 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 AKR1C2P52895 323 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 DVL1P1P54792 670 aaPredicted RBP5.4□□□□□ -1.54
VPS41-204ENST00000413141 PRRX1P54821 245 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 FGL1Q08830 312 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 IL15RAQ13261 267 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 DIAPH2-AS1Q14236 149 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 LRRC37A5PQ49AS3 106 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 FAM219AQ8IW50 185 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 ZBTB8BQ8NAP8 495 aaPredicted RBP5.4□□□□□ -1.54
VPS41-204ENST00000413141 OR11H4Q8NGC9 324 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 OR4D5Q8NGN0 318 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 OR4S2Q8NH73 311 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
VPS41-204ENST00000413141 GRPEL2Q8TAA5 225 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 LSM10Q969L4 123 aaKnown RBP5.4□□□□□ -1.54
VPS41-204ENST00000413141 C1orf159Q96HA4 380 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 HYLS1Q96M11 299 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 TBX15Q96SF7 602 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 SPIN2AQ99865 258 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 SPIN2BQ9BPZ2 258 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 RANBP3Q9H6Z4 567 aaPredicted RBP5.4□□□□□ -1.54
VPS41-204ENST00000413141 HEXA-AS1Q9H8Q6 139 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 PLEKHA2Q9HB19 425 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 COMMD9Q9P000 198 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 INSIG2Q9Y5U4 225 aa5.4□□□□□ -1.54
VPS41-204ENST00000413141 SPG11Q96JI7 2443 aa5.4□□□□□ -1.55
VPS41-204ENST00000413141 YLPM1P49750 1951 aaKnown RBP5.4□□□□□ -1.55
VPS41-204ENST00000413141 UNC79Q9P2D8 2635 aa5.4□□□□□ -1.55
VPS41-204ENST00000413141 NAV2Q8IVL1 2488 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 APCP25054 2843 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 CSMD1Q96PZ7 3565 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 RNASEK-C17orf49H0YIS7 233 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 H0YJW9 148 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 LY6LH3BQJ8 138 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 TXNL1O43396 289 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 ATG12O94817 140 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 TOX4O94842 621 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 MPC2O95563 127 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 CRYZL1O95825 349 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms