RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NAPSAO96009 420 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 TFF3Q07654 80 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 CEACAM21Q3KPI0 293 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 TMEM251Q8N6I4 163 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 RFESDQ8TAC1 157 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
CLTCL1-201ENST00000412649 AMY1AP04745 511 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 FOXL1Q12952 345 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 KCNS1Q96KK3 526 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 FAM186AA6NE01 2351 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 GAGE10A6NGK3 116 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 PRR19A6NJB7 356 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 DEFB108AA8MXU0 73 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 RAB29O14966 203 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 TRAT1Q6PIZ9 186 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 PLPPR2Q96GM1 343 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 WNT5BQ9H1J7 359 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 CABIN1Q9Y6J0 2220 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 GDF9O60383 454 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 PIAS2O75928 621 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 CLPSP04118 112 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 GZMHP20718 246 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 FXYD3Q14802 87 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 COA6Q5JTJ3 125 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 SLC25A34Q6PIV7 304 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 OR10D3Q8NH80 312 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 MAP1LC3CQ9BXW4 147 aa11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 DUSP15Q9H1R2 295 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-201ENST00000412649 RPL24P83731 157 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 MZT1Q08AG7 82 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 IBA57Q5T440 356 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 LINC01551Q86U37 167 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 ORAOV1Q8WV07 137 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 IGHV3-43A0A0B4J1X8 118 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 C5orf63A6NC05 138 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 IGHV3-43DP0DP04 118 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 WIPI1Q5MNZ9 446 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 DUSP23Q9BVJ7 150 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 GABRA6Q16445 453 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 NIT1Q86X76 327 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 MRGPRDQ8TDS7 321 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 ZNF524Q96C55 264 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 LIME1Q9H400 295 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 DENND4CQ5VZ89 1909 aa11.84□□□□□ -0.51
CLTCL1-201ENST00000412649 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 J3QT63 122 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 SYNGR1O43759 233 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 IGHV4-34P06331 123 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 CYC1P08574 325 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 TEPPQ6URK8 271 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 SAXO1Q8IYX7 474 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 TMEM54Q969K7 222 aa11.83□□□□□ -0.51
CLTCL1-201ENST00000412649 DOCK8Q8NF50 2099 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 MED12Q93074 2177 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 A0A1B0GUS0 222 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 UBE2V1Q13404 147 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 RTL8BQ17RB0 113 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 ACSF3Q4G176 576 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 LDLRAD2Q5SZI1 272 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 LYPD6Q86Y78 171 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 A0A0J9YW62 118 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 CYB561P49447 251 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 FAM19A2Q8N3H0 131 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 SPSB4Q96A44 273 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 DLL3Q9NYJ7 618 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 A6NDN8 102 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 BCL2L2Q92843 193 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 FAM131CQ96AQ9 280 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 PNRC2Q9NPJ4 139 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
CLTCL1-201ENST00000412649 IGKV1-12A0A0C4DH73 117 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 hCG_38984A0A1B0GV85 526 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 TMEM50AO95807 157 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 IGKV1D-12P01611 117 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 IGHEP01854 428 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 FA2HQ7L5A8 372 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 DRAM1Q8N682 238 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 DECR2Q9NUI1 292 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 ELOVL5Q9NYP7 299 aa11.82□□□□□ -0.52
CLTCL1-201ENST00000412649 ISLRO14498 428 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms