RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 C5orf66Q9H5L9 145 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 CELA2AP08217 269 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 FABP6P51161 128 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ZNF136P52737 540 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 MGAT2Q10469 447 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 GTF3C1Q12789 2109 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 RTP5Q14D33 572 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TBR1Q16650 682 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 FAM69BQ5VUD6 431 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 LCN12Q6JVE5 192 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 HAPLN4Q86UW8 402 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 GCSAMQ8N6F7 178 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR52E2Q8NGJ4 325 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR4C3Q8NH37 302 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR4A16Q8NH70 328 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 C18orf32Q8TCD1 76 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 CYB5D2Q8WUJ1 264 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ST6GALNAC6Q969X2 333 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MRPL24Q96A35 216 aaKnown RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 ADTRPQ96IZ2 230 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 C1orf43Q9BWL3 253 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SIRPDQ9H106 197 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 BPIFA1Q9NP55 256 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MED31Q9Y3C7 131 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 CA2P00918 260 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 SRD5A1P18405 259 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CST5P28325 142 aaPredicted RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 MOB1BQ7L9L4 216 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CRIPAKQ8N1N5 446 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 OR5AN1Q8NGI8 311 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 ZNRF4Q8WWF5 429 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 FAM131CQ96AQ9 280 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 ABHD14BQ96IU4 210 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 FAM206AQ9NX38 181 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 DOCK6Q96HP0 2047 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PPI3 338 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 OOEPA6NGQ2 149 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 H0YIG0 161 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 H3BML4 177 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 IFI6P09912 130 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 FBXO45P0C2W1 286 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 GRPRP30550 384 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 TCTAP57738 103 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 RPS24P62847 133 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 WFDC2Q14508 124 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 ZFAND6Q6FIF0 208 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 OCC1Q8TAD7 63 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 IRF7Q92985 503 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 ZNF501Q96CX3 271 aaPredicted RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 ZG16BQ96DA0 208 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CLEC7AQ9BXN2 247 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 COL25A1Q9BXS0 654 aaPredicted RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 LHX3Q9UBR4 397 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 INSIG2Q9Y5U4 225 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 FNDC10F2Z333 226 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 PITX3O75364 302 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CSN3P07498 182 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 MRPL3P09001 348 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 CPMP14384 443 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CA7P43166 264 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 MANFP55145 182 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 CLRN1P58418 232 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 RPL23P62829 140 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 QRFPP83859 136 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CYP2G1PQ6ZSU1 146 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 DOK3Q7L591 496 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 SGPP2Q8IWX5 399 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 OR4K13Q8NH42 304 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 C1orf123Q9NWV4 160 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CCNL1Q9UK58 526 aaPredicted RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 VWA8A3KMH1 1905 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 TRAV9-1A0A075B6T8 112 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 A0A087X0K7 114 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 A6NDN8 102 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CPSF4LA6NMK7 179 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 RHODO00212 210 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 RER1O15258 196 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CXCL10P02778 98 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CT45A6P0DMU7 189 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CT45A5P0DMU8 189 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CT45A7P0DMV0 189 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CRISP2P16562 243 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 HIST1H1TP22492 207 aaPredicted RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 NTF4P34130 210 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 WASP42768 502 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CCL23P55773 120 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 LGALS4P56470 323 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CT45A1Q5HYN5 189 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 LINC01590Q5TEZ4 76 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 LINC00114Q6XXX2 140 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 ZNF841Q6ZN19 808 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 CT45A3Q8NHU0 189 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 LINC01587Q99440 93 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
HERC4-205ENST00000412272 COL4A6Q14031 1691 aa4.41□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PS18 150 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms