RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 C1orf185Q5T7R7 199 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 LINC00470Q9BZP3 86 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 CDK2AP2O75956 126 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 SBK3P0C264 359 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 BATF2Q8N1L9 274 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 OTOFQ9HC10 1997 aa6.41□□□□□ -1.38
PTPN3-203ENST00000412145 GGTLC3B5MD39 225 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 K7ESM1 405 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 HSPE1P61604 102 aaKnown RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 ISOC2Q96AB3 205 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 HDHD3Q9BSH5 251 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 SDF2L1Q9HCN8 221 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 NXT2Q9NPJ8 142 aaKnown RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 CCL28Q9NRJ3 127 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 NRXN3Q9Y4C0 1643 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 NDUFB4O95168 129 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 MYOD1P15172 320 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 ABCA3Q99758 1704 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 PSG2P11465 335 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 RTN4RL2Q86UN3 420 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 FAM90A1Q86YD7 464 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 OR9G4Q8NGQ1 327 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 PRSS27Q9BQR3 290 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 A0A1B0GUT8 65 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 TM4SF5O14894 197 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 RNASE1P07998 156 aaKnown RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 SRIP30626 198 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF137PP52743 207 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 CXorf66Q5JRM2 361 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-203ENST00000412145 UNQ9370/PRO34162Q6UXP9 181 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 LINC01465Q8N7H1 131 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 CACNG8Q8WXS5 425 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 SMIM14Q96QK8 99 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 TUBA4BQ9H853 241 aa6.4□□□□□ -1.38
PTPN3-203ENST00000412145 CXCL10P02778 98 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 NPPCP23582 126 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.39
PTPN3-203ENST00000412145 ST6GALNAC2Q9UJ37 374 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 ZNFX1Q9P2E3 1918 aaKnown RBP6.4□□□□□ -1.39
PTPN3-203ENST00000412145 C3orf80F5H4A9 247 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 IGHV4-34P06331 123 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 PRSS36Q5K4E3 855 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 ORMDL3Q8N138 153 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 TRBV23-1A0A0A0MS06 115 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 LOC390937A0A1W2PQ73 354 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 PGPEP1LA6NFU8 196 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 ZFAND6Q6FIF0 208 aa6.4□□□□□ -1.39
PTPN3-203ENST00000412145 CXorf67Q86X51 503 aaPredicted RBP6.4□□□□□ -1.39
PTPN3-203ENST00000412145 DDX60LQ5H9U9 1706 aaKnown RBP6.4□□□□□ -1.39
PTPN3-203ENST00000412145 TRBV20OR9-2A0A075B6H5 130 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 SP9P0CG40 484 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RAE1P78406 368 aaKnown RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 CCL7P80098 99 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 GLCCI1Q86VQ1 547 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 VSTM2LQ96N03 204 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 SPAG8Q99932 426 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 SLC25A15Q9Y619 301 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 PRSS53Q2L4Q9 553 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 DNASE2BQ8WZ79 361 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 ASCL2Q99929 193 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 FRRS1LQ9P0K9 344 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 KLK10O43240 276 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 MUC1P15941 1255 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 AHRRA9YTQ3 701 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 ETHE1O95571 254 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 OR9G1Q8NH87 305 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 CARHSP1Q9Y2V2 147 aaKnown RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 DNAJC13O75165 2243 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 TRAV8-7A0A075B6U6 113 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 ZIC1Q15915 447 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 GCSAMLQ5JQS6 135 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 TIMM23BQ5SRD1 257 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RASL11AQ6T310 242 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 LINC00518Q8N0U6 118 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RGP1Q92546 391 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 DERL1Q9BUN8 251 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RGPD2P0DJD1 1756 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 IGHV1OR21-1A0A087WYE8 117 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RRHO14718 337 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 SYNGR3O43761 229 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 GFERP55789 205 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 TNFRSF9Q07011 255 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 NRN1LQ496H8 165 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 PRDM13Q9H4Q3 707 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 CYSLTR1Q9Y271 337 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 F5P12259 2224 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 DOCK1Q14185 1865 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 SRSF6Q13247 344 aaKnown RBP6.39□□□□□ -1.39
PTPN3-203ENST00000412145 FAM166AQ6J272 317 aa6.39□□□□□ -1.39
PTPN3-203ENST00000412145 RFLNAQ6ZTI6 216 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms