RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 MS4A15Q8N5U1 240 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 PHYHIPQ92561 330 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 THAP7Q9BT49 309 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-220ENST00000411464 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 COA4Q9NYJ1 87 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 AK3Q9UIJ7 227 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 CEPT1Q9Y6K0 416 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.38
MRPL55-220ENST00000411464 STARD9Q9P2P6 4700 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 SHISA3A0PJX4 238 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 M0R1X1 148 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 BPNT1O95861 308 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 RBM48Q5RL73 367 aaKnown RBP12.7□□□□□ -0.38
MRPL55-220ENST00000411464 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 BVESQ8NE79 360 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 SNAPC3Q92966 411 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 HDHD3Q9BSH5 251 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-220ENST00000411464 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
MRPL55-220ENST00000411464 HIPK2Q9H2X6 1198 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 KCNK15Q9H427 330 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 RETNQ9HD89 108 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 Q9N2K0 584 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 C8orf4Q9NR00 106 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 ADAM30Q9UKF2 790 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 LYSTQ99698 3801 aa12.7□□□□□ -0.38
MRPL55-220ENST00000411464 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 SOCS1O15524 211 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 OR2A4O95047 310 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 SRMP19623 302 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 CD81P60033 236 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 SSBP2P81877 361 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-220ENST00000411464 DHRSXQ8N5I4 330 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 NANOGP1Q8N7R0 232 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-220ENST00000411464 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 PHB2Q99623 299 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 PLEKHA3Q9HB20 300 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 C12orf4Q9NQ89 552 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 RDH8Q9NYR8 311 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 PSORS1C1Q9UIG5 152 aa12.69□□□□□ -0.38
MRPL55-220ENST00000411464 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 A0A0A6YYD4 124 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 A0A0B4J203 849 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 TPPPO94811 219 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 TRBV12-3P01733 135 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 CRYGBP07316 175 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 QRFPP83859 136 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 DEFA5Q01523 94 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 CBX3Q13185 183 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 LINC00322Q6ZN03 302 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-220ENST00000411464 AHSA2Q719I0 299 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 VCXQ9H320 206 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 HSF4Q9ULV5 492 aa12.68□□□□□ -0.38
MRPL55-220ENST00000411464 MSGN1A6NI15 193 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 AIREO43918 545 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 APELAP0DMC3 54 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 SERPINB10P48595 397 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
MRPL55-220ENST00000411464 DYRK1AQ13627 763 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 HSD17B12Q53GQ0 312 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 CMSS1Q9BQ75 279 aaKnown RBP12.67□□□□□ -0.38
MRPL55-220ENST00000411464 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 VCX3BQ9H321 246 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 SLC2A8Q9NY64 477 aa12.67□□□□□ -0.38
MRPL55-220ENST00000411464 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 SHOXO15266 292 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 AQP4P55087 323 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 TAGLNQ01995 201 aaKnown RBP12.66□□□□□ -0.38
MRPL55-220ENST00000411464 P2RY14Q15391 338 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 LAX1Q8IWV1 398 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-220ENST00000411464 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 PLGRKTQ9HBL7 147 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 PLCXD1Q9NUJ7 323 aa12.66□□□□□ -0.38
MRPL55-220ENST00000411464 MPPED1O15442 326 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 OR9G9P0C7N8 305 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 CD37P11049 281 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-220ENST00000411464 ADAD2Q8NCV1 583 aaKnown RBP12.65□□□□□ -0.38
MRPL55-220ENST00000411464 ARHGAP5-AS1Q96IT6 56 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 MND1Q9BWT6 205 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 OR2D2Q9H210 308 aa12.65□□□□□ -0.38
MRPL55-220ENST00000411464 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
MRPL55-220ENST00000411464 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
MRPL55-220ENST00000411464 BET1O15155 118 aa12.64□□□□□ -0.39
MRPL55-220ENST00000411464 RRASP10301 218 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms