RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 C15orf65H3BRN8 121 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 RAB29O14966 203 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF737O75373 536 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 YIF1AO95070 293 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 PAX5Q02548 391 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 HNF4GQ14541 408 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF674Q2M3X9 581 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
HOXD3-202ENST00000410016 CD177Q8N6Q3 437 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 DTD1Q8TEA8 209 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 LHX4Q969G2 390 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 TMPRSS5Q9H3S3 457 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 DOK5Q9P104 306 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 IGHV3-43A0A0B4J1X8 118 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 PRR33A8MZF0 331 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 CYB5BO43169 146 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 PROP1O75360 226 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 CYB5R3P00387 301 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-202ENST00000410016 IGHV3-43DP0DP04 118 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 SMIM21Q3B7S5 101 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF610Q8N9Z0 462 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 DCTN5Q9BTE1 182 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
HOXD3-202ENST00000410016 IGHV2OR16-5A0A0B4J2B6 119 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 DEFB108AA8MXU0 73 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BKO60814 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BJP06899 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 MDKP21741 143 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BOP23527 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BBP33778 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BDP58876 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BCP62807 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST2H2BEQ16778 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 ANKRD39Q53RE8 183 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BHQ93079 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BNQ99877 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 HIST1H2BMQ99879 126 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 DKK4Q9UBT3 224 aa13.24□□□□□ -0.29
HOXD3-202ENST00000410016 IGHV1-18A0A0C4DH31 117 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 CLDN34H7C241 214 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 TNFSF13O75888 250 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 TRGC2P03986 189 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
HOXD3-202ENST00000410016 HTD2P86397 168 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 VWC2Q2TAL6 325 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 H2BFWTQ7Z2G1 175 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 PIP4P1Q86T03 277 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 OR10P1Q8NGE3 313 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF71Q9NQZ8 489 aaPredicted RBP13.23□□□□□ -0.29
HOXD3-202ENST00000410016 TRAV17A0A0B4J275 112 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 CGAP01215 116 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 FABP1P07148 127 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 MEF2BQ02080 365 aaPredicted RBP13.23□□□□□ -0.29
HOXD3-202ENST00000410016 SARAFQ96BY9 339 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
HOXD3-202ENST00000410016 ASCL3Q9NQ33 180 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 PSG11Q9UQ72 335 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 LAMP3Q9UQV4 416 aa13.23□□□□□ -0.29
HOXD3-202ENST00000410016 DOCK11Q5JSL3 2073 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 HMGB3O15347 200 aaKnown RBP13.22□□□□□ -0.29
HOXD3-202ENST00000410016 IFNA1P01562 189 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 SELLP14151 372 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 GCH1P30793 250 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 PRDX2P32119 198 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 NDUFA6P56556 154 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 NCR3LG1Q68D85 454 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 STARD4Q96DR4 205 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 CIB3Q96Q77 187 aaPredicted RBP13.22□□□□□ -0.29
HOXD3-202ENST00000410016 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 SSX3Q99909 188 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 MARCH11A6NNE9 402 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 ADH4P08319 380 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 RPS16P62249 146 aaKnown RBP13.22□□□□□ -0.29
HOXD3-202ENST00000410016 GNB2P62879 340 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 ABHD5Q8WTS1 349 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 LRRC29Q8WV35 223 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 FAM210BQ96KR6 192 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 NPCDR1Q9BY65 106 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 OR51M1Q9H341 326 aa13.22□□□□□ -0.29
HOXD3-202ENST00000410016 CTXND1A0A1B0GTU2 59 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 PHOX2AO14813 284 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 EGR1P18146 543 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 FGF7P21781 194 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 TFF3Q07654 80 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 Q8N7P7 452 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 OPN3Q9H1Y3 402 aaPredicted RBP13.21□□□□□ -0.29
HOXD3-202ENST00000410016 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 CACNA1HO95180 2353 aa13.21□□□□□ -0.29
HOXD3-202ENST00000410016 IGKV1D-17A0A075B6S4 117 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms