RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TNFRSF1AP19438 455 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 UCNP55089 124 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 TAGLNQ01995 201 aaKnown RBP16.66■□□□□ 0.26
USP39-204ENST00000409766 ADAM5Q6NVV9 412 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 CCL13Q99616 98 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 IFI27L2Q9H2X8 130 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 KBTBD11-OT1A0A1B0GTJ5 212 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 FAM74A7A6NL05 159 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 ATXN7O15265 892 aaPredicted RBP16.65■□□□□ 0.26
USP39-204ENST00000409766 F12P00748 615 aaPredicted RBP16.65■□□□□ 0.26
USP39-204ENST00000409766 IFNA5P01569 189 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 GYPAP02724 150 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 GUK1Q16774 197 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 FAM74A3Q4VXF1 159 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 SPANXN5Q5MJ07 72 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 H2BFWTQ7Z2G1 175 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 CLN8Q9UBY8 286 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 ITGB1BP1O14713 200 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 IGHV3-7P01780 117 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 HBG1P69891 147 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 HBG2P69892 147 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 UTF1Q5T230 341 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 TCF23Q7RTU1 214 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 ZCCHC24Q8N2G6 241 aaKnown RBP16.65■□□□□ 0.26
USP39-204ENST00000409766 ZNF525Q8N782 197 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 FAM216BQ8N7L0 139 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 C17orf50Q8WW18 174 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 RAB9BQ9NP90 201 aa16.65■□□□□ 0.26
USP39-204ENST00000409766 ROS1P08922 2347 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 TRGV10A0A0A0MS01 117 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 MARCH11A6NNE9 402 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 TMEM14EPQ6UXP3 125 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 GFOD1Q9NXC2 390 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 IGF2RP11717 2491 aa16.64■□□□□ 0.25
USP39-204ENST00000409766 SNAPINO95295 136 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 THNSL2Q86YJ6 484 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 LFNGQ8NES3 379 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 GAB2Q9UQC2 676 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 M0R1X1 148 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 SLC31A2O15432 143 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 PEA15Q15121 130 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 LINC00574Q9H8X3 128 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 NGBQ9NPG2 151 aa16.63■□□□□ 0.25
USP39-204ENST00000409766 HCFC1P51610 2035 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 FCGR3BO75015 233 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 RAB7AP51149 207 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 CT45A1Q5HYN5 189 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 SP5Q6BEB4 398 aaPredicted RBP16.62■□□□□ 0.25
USP39-204ENST00000409766 SLC25A24Q6NUK1 477 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 SPSB3Q6PJ21 355 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 CT45A3Q8NHU0 189 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 LEAP2Q969E1 77 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 R3HDM4Q96D70 268 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 EIF5A2Q9GZV4 153 aaKnown RBP16.62■□□□□ 0.25
USP39-204ENST00000409766 FBXO7Q9Y3I1 522 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 DOCK11Q5JSL3 2073 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 TRGV8A0A0C4DH27 118 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 LOC105371267A0A1B0GV96 52 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 SHISA9B4DS77 424 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 GPR37O15354 613 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 RBFOX2O43251 390 aaKnown RBP eCLIP16.62■□□□□ 0.25
USP39-204ENST00000409766 PPIHO43447 177 aaKnown RBP16.62■□□□□ 0.25
USP39-204ENST00000409766 HPRT1P00492 218 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 NPBWR1P48145 328 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 TLE1Q04724 770 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 AKR1C8PQ5T2L2 129 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 C1orf229Q6ZS94 237 aaPredicted RBP16.62■□□□□ 0.25
USP39-204ENST00000409766 CORO2AQ92828 525 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 HIPK2Q9H2X6 1198 aa16.62■□□□□ 0.25
USP39-204ENST00000409766 A0A1B0GW64 132 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 PPT1P50897 306 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 LRRC75BQ2VPJ9 315 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 DPPA3Q6W0C5 159 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 DMRTC2Q8IXT2 367 aaPredicted RBP16.61■□□□□ 0.25
USP39-204ENST00000409766 LILRB2Q8N423 598 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 SCGB1C1Q8TD33 95 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 OR4C12Q96R67 309 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 SAP30LQ9HAJ7 183 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 POLEQ07864 2286 aa16.61■□□□□ 0.25
USP39-204ENST00000409766 A0A1B0GV50 99 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 ZNF729A6NN14 1252 aaPredicted RBP16.6■□□□□ 0.25
USP39-204ENST00000409766 VSTM5A8MXK1 200 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 H2AFB1P0C5Y9 115 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 OR8U8P0C7N1 319 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 CCL20P78556 96 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 NCMAPQ5T1S8 102 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 DTD1Q8TEA8 209 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 RSG1Q9BU20 258 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 PBDC1Q9BVG4 233 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 PARD6GQ9BYG4 376 aaPredicted RBP16.6■□□□□ 0.25
USP39-204ENST00000409766 EGLN1Q9GZT9 426 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 TMPRSS2O15393 492 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 ZG16O60844 167 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 SLC38A11Q08AI6 406 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 AARDQ4LEZ3 155 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 DDB2Q92466 427 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 ZDHHC16Q969W1 377 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 KPTNQ9Y664 436 aa16.6■□□□□ 0.25
USP39-204ENST00000409766 TRAV38-1A0A0B4J264 116 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms