RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 PSPNO60542 156 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 DFFBO76075 338 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 HBE1P02100 147 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 UCP1P25874 307 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 SPNS3Q6ZMD2 512 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
COL6A2-204ENST00000409416 TECTBQ96PL2 329 aa11.31□□□□□ -0.6
COL6A2-204ENST00000409416 HAND1O96004 215 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 UCP2P55851 309 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 TAS2R30P59541 319 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 DAZAP2Q15038 168 aaPredicted RBP11.3□□□□□ -0.6
COL6A2-204ENST00000409416 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 SSMEM1Q8WWF3 244 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 PATZ1Q9HBE1 687 aaKnown RBP11.3□□□□□ -0.6
COL6A2-204ENST00000409416 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 NAV3Q8IVL0 2385 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
COL6A2-204ENST00000409416 IGHV3-21A0A0B4J1V1 117 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 PPP1R2P9O14990 202 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 SYNGR2O43760 224 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 NAPSAO96009 420 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 FABP4P15090 132 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 ID3Q02535 119 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
COL6A2-204ENST00000409416 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
COL6A2-204ENST00000409416 TOX4O94842 621 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 IL24Q13007 206 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 PYY3Q5JQD4 70 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 WDR25Q64LD2 544 aaPredicted RBP11.29□□□□□ -0.6
COL6A2-204ENST00000409416 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 LHX4Q969G2 390 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 SLC39A9Q9NUM3 307 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 H0Y980 276 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 PRAMEF5Q5TYX0 476 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 GALMQ96C23 342 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
COL6A2-204ENST00000409416 SNX22Q96L94 193 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 K7EM74 188 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 COL10A1Q03692 680 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 Q6ZSR3 168 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 OR5D13Q8NGL4 314 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 SNIP1Q8TAD8 396 aaKnown RBP11.29□□□□□ -0.6
COL6A2-204ENST00000409416 CCL17Q92583 94 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
COL6A2-204ENST00000409416 MYOD1P15172 320 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 PAX6P26367 422 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 PAX9P55771 341 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 ARL16Q0P5N6 197 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 ELOBQ15370 118 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 OR5A2Q8NGI9 324 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
COL6A2-204ENST00000409416 FAM122AQ96E09 287 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
COL6A2-204ENST00000409416 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
COL6A2-204ENST00000409416 S100A7P31151 101 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 RNPS1Q15287 305 aaKnown RBP11.28□□□□□ -0.6
COL6A2-204ENST00000409416 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 REC114Q7Z4M0 266 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 FRZBQ92765 325 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 CABLES2Q9BTV7 478 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 GPR87Q9BY21 358 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 MAP1LC3B2A6NCE7 125 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 S1PR2O95136 353 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 HBG1P69891 147 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 HBG2P69892 147 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 MAP1LC3BQ9GZQ8 125 aa11.28□□□□□ -0.6
COL6A2-204ENST00000409416 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.6
COL6A2-204ENST00000409416 HBZP02008 142 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.6
COL6A2-204ENST00000409416 PCSK4Q6UW60 755 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 OR4F5Q8NH21 305 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 OR5P3Q8WZ94 311 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 OR4F4Q96R69 305 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.6
COL6A2-204ENST00000409416 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.6
COL6A2-204ENST00000409416 ZG16O60844 167 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 CECR9P0C854 216 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms