RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 PRF1P14222 555 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 CA7P43166 264 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 ASB10Q8WXI3 467 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 LOC285556D6RIA3 1793 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 FAM90A26D6RGX4 464 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 PSG2P11465 335 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 KLK2P20151 261 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 CACNA1EQ15878 2313 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 PIMREGQ9BSJ6 248 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 CFAP161Q6P656 301 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 EDA2RQ9HAV5 297 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 SLC6A13Q9NSD5 602 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 GPX1P07203 203 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.1□□□□□ -0.47
AFF3-202ENST00000409236 OR2H1Q9GZK4 316 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
AFF3-202ENST00000409236 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 LDLRAD2Q5SZI1 272 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 LHX8Q68G74 356 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 RHNO1Q9BSD3 238 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 PTPRFP10586 1907 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
AFF3-202ENST00000409236 GPR183P32249 361 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 LINC01559Q495D7 138 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 TRGV8A0A0C4DH27 118 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 TBC1D29Q9UFV1 150 aa12.1□□□□□ -0.47
AFF3-202ENST00000409236 SFTPCP11686 197 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 TMEM202A6NGA9 273 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 MMD2Q8IY49 270 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 PGLYRP3Q96LB9 341 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
AFF3-202ENST00000409236 PLPP3O14495 311 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 LOXL3P58215 753 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 PTP4A3O75365 173 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 MVDP53602 400 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 HMGCLL1Q8TB92 370 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 CACNA1GO43497 2377 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 ZNF124Q15973 351 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 VAX1Q5SQQ9 334 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 SYNGR3O43761 229 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 MALP21145 153 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 SCGB3A1Q96QR1 104 aa12.09□□□□□ -0.47
AFF3-202ENST00000409236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.08□□□□□ -0.47
AFF3-202ENST00000409236 THAP10Q9P2Z0 257 aaPredicted RBP12.08□□□□□ -0.47
AFF3-202ENST00000409236 CTSVO60911 334 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 TNFRSF18Q9Y5U5 241 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 ID4P47928 161 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 MRPL43Q8N983 215 aaKnown RBP12.08□□□□□ -0.48
AFF3-202ENST00000409236 BTAF1O14981 1849 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
AFF3-202ENST00000409236 CT83Q5H943 113 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 ARID2Q68CP9 1835 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 ZNF32P17041 273 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 CD300CQ08708 224 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 MMDQ15546 238 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
AFF3-202ENST00000409236 PDLIM7Q9NR12 457 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 RICTORQ6R327 1708 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 ZNF585BQ52M93 769 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 A0A1B0GTH9 108 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 OR52M1Q8NGK5 317 aa12.08□□□□□ -0.48
AFF3-202ENST00000409236 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
AFF3-202ENST00000409236 TRAV17A0A0B4J275 112 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 IL11RAQ14626 422 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 LOXL2Q9Y4K0 774 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 DANCRP0C864 163 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 ESDP10768 282 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 A0A087WWC5 75 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 NMBP08949 121 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 H3BUT2 72 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
AFF3-202ENST00000409236 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 FFAR1O14842 300 aa12.07□□□□□ -0.48
AFF3-202ENST00000409236 WNT10AQ9GZT5 417 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms