RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 PSG11Q9UQ72 335 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 ZNF716A6NP11 495 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 CA11O75493 328 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 FOXO1Q12778 655 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 C10orf128Q5T292 105 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 GGNQ86UU5 652 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 C14orf144Q96I85 54 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 GYPAP02724 150 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 RIPPLY2Q5TAB7 128 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 BHLHA15Q7RTS1 189 aaPredicted RBP13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 TBX15Q96SF7 602 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 TAAR3PQ9P1P4 343 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 IGKV1D-13A0A0B4J2D9 117 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 IGKV1-13P0DP09 117 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 CLDN18P56856 261 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 OR4X1Q8NH49 305 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
CCDC85A-201ENST00000407595 RHBDL1O75783 438 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 NGBQ9NPG2 151 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 A0A1B0GU03 582 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 DUXBA0A1W2PPF3 345 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 G6PCP35575 357 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 CDC34P49427 236 aaPredicted RBP13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 DPPA3Q6W0C5 159 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 GALMQ96C23 342 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 COL6A3P12111 3177 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 LRP5LA4QPB2 252 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 SMIM21Q3B7S5 101 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 SIGLECL1Q8N7X8 197 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 MISP3Q96FF7 219 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 VAMP8Q9BV40 100 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
CCDC85A-201ENST00000407595 CEACAM18A8MTB9 384 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 SYNGR3O43761 229 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 PMCHP20382 165 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 UCP2P55851 309 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 MZT1Q08AG7 82 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 KIAA1324LA8MWY0 1029 aaPredicted RBP13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 MT-CO2P00403 227 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 ANOS1P23352 680 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 TAS2R60P59551 318 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 RNFT1Q5M7Z0 435 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 TMEM183AQ8IXX5 376 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 SGMS2Q8NHU3 365 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 OR2D2Q9H210 308 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 WNT9BO14905 357 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 GPR12P47775 334 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 UCP3P55916 312 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 MTCH1Q9NZJ7 389 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 MPC1Q9Y5U8 109 aa13.35□□□□□ -0.27
CCDC85A-201ENST00000407595 A0A087WWC5 75 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CNN1P51911 297 aaKnown RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 KLF3P57682 345 aaPredicted RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CD81P60033 236 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CMTM2Q8TAZ6 248 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 PARLQ9H300 379 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 OR5B21A6NL26 309 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 ST8SIA5O15466 376 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CCL1P22362 96 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 FAM201AQ5SY85 155 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 OR4D5Q8NGN0 318 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 NOL4LQ96MY1 436 aaPredicted RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 TECTBQ96PL2 329 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 OR1A1Q9P1Q5 309 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 IGLV3-32A0A0A0MS00 114 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 GFRA3O60609 400 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 SERF2P84101 59 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 ZNF124Q15973 351 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 EGLN1Q9GZT9 426 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 PROK2Q9HC23 129 aa13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
CCDC85A-201ENST00000407595 A0A1W2PRD5 423 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 A0A1W2PRF3 423 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 A0A1W2PRM7 423 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 GRIFINA4D1Z8 144 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 H0Y980 276 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 FCN1O00602 326 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 AQP7O14520 342 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 THBS3P49746 956 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 TPPP2P59282 170 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 ERVFC1-1P60608 527 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 IL15RAQ13261 267 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 C1QL4Q86Z23 238 aa13.33□□□□□ -0.27
CCDC85A-201ENST00000407595 ABHD17AQ96GS6 310 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms