RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 NDUFA2O43678 99 aa10.46□□□□□ -0.74
SMCR8-201ENST00000406438 CDX1P47902 265 aaPredicted RBP10.46□□□□□ -0.74
SMCR8-201ENST00000406438 C9orf40Q8IXQ3 194 aa10.46□□□□□ -0.74
SMCR8-201ENST00000406438 AURKAIP1Q9NWT8 199 aaPredicted RBP10.46□□□□□ -0.74
SMCR8-201ENST00000406438 TSPOP30536 169 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 RELQ04864 619 aaPredicted RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 FLRT3Q9NZU0 649 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 PRR33A8MZF0 331 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 RPS20P60866 119 aaKnown RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 FGF12P61328 243 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 FAM216AQ8WUB2 273 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 RTN4RQ9BZR6 473 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 MGAT2Q10469 447 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 B4E171 279 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 TSPAN7P41732 249 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 UNQ9370/PRO34162Q6UXP9 181 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 MRPL24Q96A35 216 aaKnown RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 MARS2Q96GW9 593 aaKnown RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 FNDC1Q4ZHG4 1894 aaPredicted RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 CFDP00746 253 aaPredicted RBP10.45□□□□□ -0.74
SMCR8-201ENST00000406438 MFAP4P55083 255 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 GCSAMQ8N6F7 178 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 OR4B1Q8NGF8 309 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM70Q9BUB7 260 aa10.45□□□□□ -0.74
SMCR8-201ENST00000406438 TRAV8-7A0A075B6U6 113 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 C7orf77A4D0Y5 90 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 OR4C45A6NMZ5 311 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 KCNAB3O43448 404 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 SEC11BP0C7V7 166 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 LINC00869P0C866 280 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 FCGR2BP31994 310 aaPredicted RBP10.44□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF721Q8TF20 911 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 CCL13Q99616 98 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 TRAV30A0A087WSZ9 112 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 SLC16A13Q7RTY0 426 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 DSPPQ9NZW4 1301 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 SPAARA0A1B0GVQ0 90 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 A0A1W2PPE3 182 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 DLL1O00548 723 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 IGF2P01344 180 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 C12orf54Q6X4T0 127 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 HOGA1Q86XE5 327 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 OR11H7Q8NGC8 314 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 ATP5G2Q06055 141 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM131Q92545 1883 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 CD74P04233 296 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 CENPVQ7Z7K6 275 aaPredicted RBP10.44□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 AKIRIN1Q9H9L7 192 aaPredicted RBP10.44□□□□□ -0.74
SMCR8-201ENST00000406438 BCL2P10415 239 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 KLRB1Q12918 225 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
SMCR8-201ENST00000406438 BGLAPP02818 100 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 CISD1Q9NZ45 108 aaKnown RBP10.43□□□□□ -0.74
SMCR8-201ENST00000406438 K7ERU9 68 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 NPFFO15130 113 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 ATP5J2P56134 94 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 CACNG7P62955 275 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 PMS2CLQ68D20 193 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 ST6GAL2Q96JF0 529 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 PRSS27Q9BQR3 290 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 MT-ND6P03923 174 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 CX3CL1P78423 397 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 FAM27BQ5VT28 67 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 FAM214BQ7L5A3 538 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 HDHD3Q9BSH5 251 aaPredicted RBP10.43□□□□□ -0.74
SMCR8-201ENST00000406438 FCGR3AP08637 254 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 MMP16P51512 607 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 STPG1Q5TH74 334 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 C1orf53Q5VUE5 145 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 CYB561D1Q8N8Q1 229 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 LRRC3BQ96PB8 259 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 NUTF2P61970 127 aaKnown RBP10.43□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF56Q15929 161 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 C17orf51A8MQB3 221 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 MGST3O14880 152 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 GPX1P07203 203 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 C5orf67F2Z3F1 127 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 PLP1P60201 277 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 CXorf66Q5JRM2 361 aaPredicted RBP10.43□□□□□ -0.74
SMCR8-201ENST00000406438 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 MMD2Q8IY49 270 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms