RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
SNED1-205ENST00000405547 TNFRSF9Q07011 255 aa11.53□□□□□ -0.56
SNED1-205ENST00000405547 SPATA45Q537H7 98 aa11.53□□□□□ -0.56
SNED1-205ENST00000405547 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
SNED1-205ENST00000405547 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
SNED1-205ENST00000405547 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
SNED1-205ENST00000405547 RARRES2Q99969 163 aa11.53□□□□□ -0.56
SNED1-205ENST00000405547 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 LOC390937A0A1W2PQ73 354 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 PSMB2P49721 201 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 COL10A1Q03692 680 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 PSMG3Q9BT73 122 aaPredicted RBP11.52□□□□□ -0.56
SNED1-205ENST00000405547 DDA1Q9BW61 102 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.56
SNED1-205ENST00000405547 CA5BP1Q8WTZ4 195 aa11.52□□□□□ -0.56
SNED1-205ENST00000405547 SHISA3A0PJX4 238 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 SNAI3Q3KNW1 292 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 TNS1Q9HBL0 1735 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 C4orf51C9J302 202 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 NPIPB9F8W1W9 429 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 SMIM8Q96KF7 97 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 TMEM250H0YL14 139 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 RHBDL1O75783 438 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 ZNF708P17019 499 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 PKIBQ9C010 78 aa11.52□□□□□ -0.57
SNED1-205ENST00000405547 MRPL18Q9H0U6 180 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 SCARF2Q96GP6 870 aaPredicted RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
SNED1-205ENST00000405547 CEACAM18A8MTB9 384 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 OR5R1Q8NH85 324 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNED1-205ENST00000405547 TMEM187Q14656 261 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 PRDM14Q9GZV8 571 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 CLDN14O95500 239 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 OR4A8P0C604 315 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 MDKP21741 143 aaPredicted RBP11.51□□□□□ -0.57
SNED1-205ENST00000405547 WNT5AP41221 380 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 MESP2Q0VG99 397 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 A0A0G2JK05 382 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 MGST3O14880 152 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 HYPMO75409 117 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 A0A0B4J293 547 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 LOC105371267A0A1B0GV96 52 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 C19orf24Q9BVV8 132 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 OR2H2O95918 312 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 ID4P47928 161 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 SLC35B1P78383 322 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
SNED1-205ENST00000405547 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
SNED1-205ENST00000405547 SPINK2P20155 84 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 TMEM45BQ96B21 275 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 EFNB1P98172 346 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 C3AR1Q16581 482 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 HES3Q5TGS1 186 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 TMEM265A0A087WTH1 108 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 CD3EP07766 207 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 OR8B3Q8NGG8 313 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 SPSB4Q96A44 273 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 RHOVQ96L33 236 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 OR8B2Q96RD0 313 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 TP53RKQ96S44 253 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 PARLQ9H300 379 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 SH2D7A6NKC9 451 aaPredicted RBP11.5□□□□□ -0.57
SNED1-205ENST00000405547 B4E171 279 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 ARL14EPLP0DKL9 152 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 TSPAN7P41732 249 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 UCP2P55851 309 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 PRNTQ86SH4 94 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 MS4A5Q9H3V2 200 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 CD82P27701 267 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
SNED1-205ENST00000405547 ZNF488Q96MN9 340 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
SNED1-205ENST00000405547 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
SNED1-205ENST00000405547 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 SFTPA2Q8IWL1 248 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 CLEC5AQ9NY25 188 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 KBTBD11O94819 623 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 VENTXO95231 258 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 TMEM238LA0A1B0GVL6 79 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 A6NJY4 79 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 MARCH11A6NNE9 402 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
SNED1-205ENST00000405547 THY1P04216 161 aa11.49□□□□□ -0.57
SNED1-205ENST00000405547 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms