RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 SSX9Q7RTT3 188 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 MAPK1IP1LQ8NDC0 245 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 OR11H4Q8NGC9 324 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 OR9G1Q8NH87 305 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 C8orf46Q8TAG6 207 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 RRNAD1Q96FB5 475 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 TMEM56Q96MV1 263 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 BOLA1Q9Y3E2 137 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 TMEM56-RWDD3S4R434 201 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 KIAA1324LA8MWY0 1029 aaPredicted RBP3.03□□□□□ -1.93
RTN4-208ENST00000404909 H7C2Y5 167 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 RBMXL2O75526 392 aaKnown RBP3.03□□□□□ -1.93
RTN4-208ENST00000404909 S1PR2O95136 353 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 HLA-GP17693 338 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 BTF3P20290 206 aaKnown RBP3.03□□□□□ -1.93
RTN4-208ENST00000404909 G6PCP35575 357 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 GZMKP49863 264 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 AP2S1P53680 142 aaPredicted RBP3.03□□□□□ -1.93
RTN4-208ENST00000404909 KLRD1Q13241 179 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 DEFB113Q30KQ7 82 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 ZNF585BQ52M93 769 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 THOC7Q6I9Y2 204 aaKnown RBP3.03□□□□□ -1.93
RTN4-208ENST00000404909 ZNF66Q6ZN08 573 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 ODF3L1Q8IXM7 274 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 VKORC1L1Q8N0U8 176 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 Q8N7P7 452 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 LY6G5BQ8NDX9 201 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 C18orf12Q96KH6 178 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 CLEC7AQ9BXN2 247 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 PRELID3BQ9Y3B1 194 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 TMED3Q9Y3Q3 217 aa3.03□□□□□ -1.93
RTN4-208ENST00000404909 TEX15Q9BXT5 2789 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TNCP24821 2201 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ITGB1BP1O14713 200 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ARPC5O15511 151 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 KCNAB3O43448 404 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 FOXH1O75593 365 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CRYZL1O95825 349 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1-39P01597 117 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1D-39P04432 117 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ARG1P05089 322 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 VDAC1P21796 283 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 PAX6P26367 422 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 PRRX1P54821 245 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 BRWD1-AS2P59051 145 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CYCSP99999 105 aaKnown RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 VMO1Q7Z5L0 202 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 LRTM2Q8N967 370 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 OR13D1Q8NGV5 346 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 C2orf50Q96LR7 162 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 HYLS1Q96M11 299 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ZNF251Q9BRH9 671 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MRPL20Q9BYC9 149 aaKnown RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 LSM5Q9Y4Y9 91 aaKnown RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 HSPB11Q9Y547 144 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGHV3-72A0A0B4J1Y9 119 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGHV2-70DA0A0C4DH43 119 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 A0A0G2JRQ6 117 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 VWC2LB2RUY7 222 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 G3V3Q6 166 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 B3GALNT1O75752 331 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TOX4O94842 621 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 USF1P22415 310 aaPredicted RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 PSMB6P28072 239 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 DSCR9P59020 149 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 EIF4EBP1Q13541 118 aaPredicted RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 RAB32Q13637 225 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 Q5PR19 223 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TGIF2LXQ8IUE1 241 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ZNF383Q8NA42 475 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 DMBX1Q8NFW5 382 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 OR1S1Q8NH92 325 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 THAP6Q8TBB0 222 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 NMES1Q9C002 83 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MAGT1Q9H0U3 335 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 A0A087X0M5 115 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TRAV14DV4A0A0A6YYC5 116 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 A0A1B0GX30 115 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MARCH11A6NNE9 402 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 RNF223E7ERA6 249 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 M0R1W7 72 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TSC22D2O75157 780 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MPC2O95563 127 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1-5P01602 117 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 RBP4P02753 201 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1-16P04430 117 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 PRTN3P24158 256 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 IL3RAP26951 378 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 THBS3P49746 956 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TAGLNQ01995 201 aaKnown RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 FGL1Q08830 312 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MSMO1Q15800 293 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 HLA-DRB5Q30154 266 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 ZBTB8BQ8NAP8 495 aaPredicted RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms